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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Cisavi.CG.ENS81.R44....'
  3. Transcript 'Boleac.CG.SB_v3.S896...'
  4. Clone 'ciad097n24'
  5. Transcript 'KH2012:KH.C10.560.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.560.v1.B.nonSL2-1

Possible name(s)

NCOR1; NCOR2; RCOR3

Location

KhC10 [2,104,362 / 2,115,416]

Sequences

Amino acid sequence

Length: 825

>KH.C10.560.v1.B.nonSL2-1
SMKPPWQSQHHVATSGNNPHHPTSRIETSQAPTSSVSDPSLVLSQLFAHQQNALHSSYLS
MYTKPDQKLPYDPRMQLPVMSASLPRSQMLGVPTPHQPLPSTNPYQQRRSAPLRVSLLRD
IDIAGERDKDTPASSGASYAYSGSALHPSQIASSSRHTQERPITMLGNMQHNYQQQQQAC
AVLSKQQDIPSFNHPSFGAQQHPAYSGLPITKEIKQEAIVVKLEEQDKGMYHPPSDNTSD
HTASQTPSVQRHAGVPTQPKQDITNPASVSYEQKSKEDLVQAMDKVDREIAKVESEINRI
QKKKTQLEESAKMPPEPEKSASSPQRVEPKHRDLWQVIYAENRKKAEAARVVLDGLCPRY
DMPLYNQPCDTKVYQQNLKKNEEMRPKLLKFFKHRSKLQNIRERYICARYDQLMQQWNNK
AERIENNVKKKAKDAKTREYFEKLFPEIRKQREQQERVDRVGTRGDSCRSDADFAQIVDG
LSEQENQLNHMRQLAVVPPMLLDRDEQRVRFISTNGFIREPFKDFKESQQLDSWAEQEKI
IFKEKFVLHPKNFNLIASFIEKKSVADCILYYYLTKKTNNYKALVRKQSMKPKKPKSGRS
HASSNNDQTGTGKDSSEKTDETKKEEEITEIKVDRPPSPRMTRARKQTMNWTEEEISLVK
EGFGKHGKDFCSISRMVTNKSEQQVKNFYHNYKKKHGLDQLITESRKKKTNESRRTRYHA
PSPDTLTTPSPDVTSSTDAKPKQEKPEEEKPFIEEEKKLADSPPSTTASTTKTVTKPETT
EAATLSTSHIRTRRITAALAAAATPEESQSAKRAVSGDSPVSTS+

Nucleotide sequence

Length: 2,571

>KH2012:KH.C10.560.v1.B.nonSL2-1
AGGACAAGCTTAACCGGTAGCTTCGTTTTTACTGCAACGTTAAGCCTTTACGTTAATTTA
TTTGTTTATATGTGAGGACGGCGCACAATAAAGTATAAAGTATGAAACCACCATGGCAAT
CCCAACACCATGTAGCTACAAGTGGAAATAATCCACACCACCCAACATCAAGGATTGAAA
CAAGTCAGGCGCCCACATCATCTGTATCTGATCCATCTCTCGTTCTCTCTCAACTTTTTG
CTCATCAACAGAATGCTCTGCATTCCTCCTACCTATCAATGTACACCAAACCAGATCAGA
AATTGCCCTATGATCCTCGGATGCAGCTCCCAGTGATGTCCGCATCACTTCCTCGTTCCC
AGATGCTCGGAGTACCCACTCCTCATCAACCACTTCCCTCCACTAATCCTTATCAACAAA
GAAGAAGTGCACCTCTTCGTGTTTCACTCCTCAGAGATATCGATATAGCAGGAGAAAGGG
ATAAAGATACACCAGCTTCTTCAGGTGCTTCATATGCATACAGTGGTTCAGCCTTACACC
CTTCTCAAATAGCAAGTAGTTCGCGCCATACACAAGAGAGACCAATTACAATGTTAGGCA
ACATGCAGCACAATTATCAACAACAACAGCAAGCTTGTGCTGTTCTTTCTAAGCAACAGG
ACATACCTTCATTTAATCACCCAAGTTTTGGTGCCCAGCAACATCCTGCTTATTCAGGCT
TGCCCATAACAAAAGAAATAAAACAGGAGGCAATAGTTGTGAAACTAGAAGAACAAGATA
AAGGAATGTATCACCCACCAAGTGATAACACATCTGATCATACAGCTTCACAAACACCTA
GTGTGCAACGGCATGCAGGTGTACCTACCCAACCTAAACAAGATATAACAAACCCAGCAA
GTGTAAGTTATGAACAAAAGTCAAAGGAAGATTTGGTTCAAGCTATGGATAAAGTGGACC
GAGAAATCGCAAAAGTTGAGAGCGAGATTAATCGCATCCAGAAGAAGAAGACACAGCTGG
AGGAGTCCGCTAAGATGCCTCCTGAGCCTGAGAAGAGCGCATCGTCACCACAGAGAGTGG
AACCAAAGCACCGAGATCTTTGGCAAGTTATTTATGCGGAAAATAGGAAAAAAGCTGAAG
CAGCACGTGTAGTGTTGGATGGGTTGTGTCCGAGGTACGACATGCCATTATATAACCAGC
CTTGTGATACTAAAGTTTATCAACAAAATCTGAAAAAAAATGAAGAAATGAGACCTAAAC
TGCTCAAGTTCTTCAAGCACCGTAGTAAGTTACAGAACATTCGTGAACGATATATTTGTG
CAAGGTATGACCAACTCATGCAACAGTGGAATAACAAAGCGGAAAGAATTGAAAACAATG
TTAAAAAGAAGGCAAAAGATGCGAAGACACGAGAGTATTTTGAAAAACTTTTCCCGGAGA
TCCGGAAGCAAAGGGAGCAACAGGAGAGAGTAGATCGTGTTGGAACGAGAGGAGACTCTT
GCAGAAGTGATGCAGATTTCGCTCAGATCGTGGATGGCTTGTCAGAACAAGAAAACCAAC
TGAACCACATGAGGCAATTGGCAGTAGTACCTCCCATGTTGTTGGATAGAGATGAGCAGA
GAGTCAGGTTCATAAGCACCAATGGATTTATAAGGGAACCTTTCAAAGATTTCAAGGAGA
GTCAGCAGCTCGACTCGTGGGCTGAACAAGAGAAGATAATATTCAAAGAAAAATTTGTTT
TACATCCAAAGAACTTCAATCTTATTGCTTCCTTTATTGAAAAAAAGAGTGTGGCAGACT
GCATTCTTTATTATTACCTTACAAAGAAAACGAACAACTACAAAGCTCTGGTTCGAAAAC
AAAGCATGAAACCTAAGAAACCAAAATCGGGTCGTTCTCATGCATCAAGCAATAATGATC
AAACTGGTACTGGAAAAGATTCATCCGAAAAAACCGACGAGACAAAAAAAGAAGAGGAAA
TTACTGAAATAAAAGTGGACCGACCCCCCTCACCAAGAATGACAAGGGCACGAAAACAGA
CAATGAATTGGACGGAGGAAGAAATATCTTTGGTTAAGGAAGGGTTTGGAAAGCATGGGA
AAGATTTCTGTTCCATCTCACGCATGGTTACCAATAAGTCAGAACAACAAGTCAAGAATT
TTTACCACAATTACAAGAAGAAACATGGCTTGGATCAACTTATAACTGAGAGCAGGAAAA
AGAAGACGAACGAATCTCGACGAACTCGTTACCACGCCCCGTCTCCTGACACTTTAACAA
CACCAAGTCCGGATGTCACTTCATCAACCGATGCAAAACCAAAACAAGAGAAACCAGAAG
AAGAGAAACCATTCATTGAAGAAGAGAAAAAGTTGGCTGATAGCCCACCTAGCACAACAG
CTTCCACAACTAAAACAGTGACCAAACCAGAGACAACTGAAGCGGCAACACTGTCCACTT
CTCACATACGTACACGGCGCATCACTGCTGCTTTGGCTGCTGCTGCAACACCAGAAGAAA
GTCAAAGTGCAAAGAGAGCTGTGAGTGGTGACTCTCCAGTGTCAACTAGTG

InterProScan

Pfam
N-CoR_GPS2_interact (IPR031557) - T[260-336] 2.5E-19
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[519-582] 1.4E-12 - T[647-698] 3.81E-11
ProSiteProfiles
SANT_dom (IPR017884) - T[529-580] 18.338 - T[646-697] 15.659
SMART
SANT/Myb (IPR001005) - T[530-578] 8.8E-6 - T[647-695] 2.8E-11
Pfam
SANT/Myb (IPR001005) - T[648-693] 3.3E-9
CDD
SANT/Myb (IPR001005) - T[650-693] 1.48225E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NCOR1_HUMAN 58.491 % 387 9.38E-116
NCOR2_HUMAN 57.053 % 390 9.62E-117





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