- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Boleac.CG.SB_v3.S896...' >
- Transcript 'KH2012:KH.L172.26.v1...' >
- Transcript 'KH2012:KH.L131.10.v1...' >
- Transcript 'KH2012:KH.C10.560.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.560.v1.B.nonSL2-1
Possible name(s)
NCOR1; NCOR2; RCOR3
Gene model
Location
KhC10 [2,104,362 / 2,115,416]
Amino acid sequence
Length: 825
>KH.C10.560.v1.B.nonSL2-1
SMKPPWQSQHHVATSGNNPHHPTSRIETSQAPTSSVSDPSLVLSQLFAHQQNALHSSYLS
MYTKPDQKLPYDPRMQLPVMSASLPRSQMLGVPTPHQPLPSTNPYQQRRSAPLRVSLLRD
IDIAGERDKDTPASSGASYAYSGSALHPSQIASSSRHTQERPITMLGNMQHNYQQQQQAC
AVLSKQQDIPSFNHPSFGAQQHPAYSGLPITKEIKQEAIVVKLEEQDKGMYHPPSDNTSD
HTASQTPSVQRHAGVPTQPKQDITNPASVSYEQKSKEDLVQAMDKVDREIAKVESEINRI
QKKKTQLEESAKMPPEPEKSASSPQRVEPKHRDLWQVIYAENRKKAEAARVVLDGLCPRY
DMPLYNQPCDTKVYQQNLKKNEEMRPKLLKFFKHRSKLQNIRERYICARYDQLMQQWNNK
AERIENNVKKKAKDAKTREYFEKLFPEIRKQREQQERVDRVGTRGDSCRSDADFAQIVDG
LSEQENQLNHMRQLAVVPPMLLDRDEQRVRFISTNGFIREPFKDFKESQQLDSWAEQEKI
IFKEKFVLHPKNFNLIASFIEKKSVADCILYYYLTKKTNNYKALVRKQSMKPKKPKSGRS
HASSNNDQTGTGKDSSEKTDETKKEEEITEIKVDRPPSPRMTRARKQTMNWTEEEISLVK
EGFGKHGKDFCSISRMVTNKSEQQVKNFYHNYKKKHGLDQLITESRKKKTNESRRTRYHA
PSPDTLTTPSPDVTSSTDAKPKQEKPEEEKPFIEEEKKLADSPPSTTASTTKTVTKPETT
EAATLSTSHIRTRRITAALAAAATPEESQSAKRAVSGDSPVSTS+
Nucleotide sequence
Length: 2,571
>KH2012:KH.C10.560.v1.B.nonSL2-1
AGGACAAGCTTAACCGGTAGCTTCGTTTTTACTGCAACGTTAAGCCTTTACGTTAATTTA
TTTGTTTATATGTGAGGACGGCGCACAATAAAGTATAAAGTATGAAACCACCATGGCAAT
CCCAACACCATGTAGCTACAAGTGGAAATAATCCACACCACCCAACATCAAGGATTGAAA
CAAGTCAGGCGCCCACATCATCTGTATCTGATCCATCTCTCGTTCTCTCTCAACTTTTTG
CTCATCAACAGAATGCTCTGCATTCCTCCTACCTATCAATGTACACCAAACCAGATCAGA
AATTGCCCTATGATCCTCGGATGCAGCTCCCAGTGATGTCCGCATCACTTCCTCGTTCCC
AGATGCTCGGAGTACCCACTCCTCATCAACCACTTCCCTCCACTAATCCTTATCAACAAA
GAAGAAGTGCACCTCTTCGTGTTTCACTCCTCAGAGATATCGATATAGCAGGAGAAAGGG
ATAAAGATACACCAGCTTCTTCAGGTGCTTCATATGCATACAGTGGTTCAGCCTTACACC
CTTCTCAAATAGCAAGTAGTTCGCGCCATACACAAGAGAGACCAATTACAATGTTAGGCA
ACATGCAGCACAATTATCAACAACAACAGCAAGCTTGTGCTGTTCTTTCTAAGCAACAGG
ACATACCTTCATTTAATCACCCAAGTTTTGGTGCCCAGCAACATCCTGCTTATTCAGGCT
TGCCCATAACAAAAGAAATAAAACAGGAGGCAATAGTTGTGAAACTAGAAGAACAAGATA
AAGGAATGTATCACCCACCAAGTGATAACACATCTGATCATACAGCTTCACAAACACCTA
GTGTGCAACGGCATGCAGGTGTACCTACCCAACCTAAACAAGATATAACAAACCCAGCAA
GTGTAAGTTATGAACAAAAGTCAAAGGAAGATTTGGTTCAAGCTATGGATAAAGTGGACC
GAGAAATCGCAAAAGTTGAGAGCGAGATTAATCGCATCCAGAAGAAGAAGACACAGCTGG
AGGAGTCCGCTAAGATGCCTCCTGAGCCTGAGAAGAGCGCATCGTCACCACAGAGAGTGG
AACCAAAGCACCGAGATCTTTGGCAAGTTATTTATGCGGAAAATAGGAAAAAAGCTGAAG
CAGCACGTGTAGTGTTGGATGGGTTGTGTCCGAGGTACGACATGCCATTATATAACCAGC
CTTGTGATACTAAAGTTTATCAACAAAATCTGAAAAAAAATGAAGAAATGAGACCTAAAC
TGCTCAAGTTCTTCAAGCACCGTAGTAAGTTACAGAACATTCGTGAACGATATATTTGTG
CAAGGTATGACCAACTCATGCAACAGTGGAATAACAAAGCGGAAAGAATTGAAAACAATG
TTAAAAAGAAGGCAAAAGATGCGAAGACACGAGAGTATTTTGAAAAACTTTTCCCGGAGA
TCCGGAAGCAAAGGGAGCAACAGGAGAGAGTAGATCGTGTTGGAACGAGAGGAGACTCTT
GCAGAAGTGATGCAGATTTCGCTCAGATCGTGGATGGCTTGTCAGAACAAGAAAACCAAC
TGAACCACATGAGGCAATTGGCAGTAGTACCTCCCATGTTGTTGGATAGAGATGAGCAGA
GAGTCAGGTTCATAAGCACCAATGGATTTATAAGGGAACCTTTCAAAGATTTCAAGGAGA
GTCAGCAGCTCGACTCGTGGGCTGAACAAGAGAAGATAATATTCAAAGAAAAATTTGTTT
TACATCCAAAGAACTTCAATCTTATTGCTTCCTTTATTGAAAAAAAGAGTGTGGCAGACT
GCATTCTTTATTATTACCTTACAAAGAAAACGAACAACTACAAAGCTCTGGTTCGAAAAC
AAAGCATGAAACCTAAGAAACCAAAATCGGGTCGTTCTCATGCATCAAGCAATAATGATC
AAACTGGTACTGGAAAAGATTCATCCGAAAAAACCGACGAGACAAAAAAAGAAGAGGAAA
TTACTGAAATAAAAGTGGACCGACCCCCCTCACCAAGAATGACAAGGGCACGAAAACAGA
CAATGAATTGGACGGAGGAAGAAATATCTTTGGTTAAGGAAGGGTTTGGAAAGCATGGGA
AAGATTTCTGTTCCATCTCACGCATGGTTACCAATAAGTCAGAACAACAAGTCAAGAATT
TTTACCACAATTACAAGAAGAAACATGGCTTGGATCAACTTATAACTGAGAGCAGGAAAA
AGAAGACGAACGAATCTCGACGAACTCGTTACCACGCCCCGTCTCCTGACACTTTAACAA
CACCAAGTCCGGATGTCACTTCATCAACCGATGCAAAACCAAAACAAGAGAAACCAGAAG
AAGAGAAACCATTCATTGAAGAAGAGAAAAAGTTGGCTGATAGCCCACCTAGCACAACAG
CTTCCACAACTAAAACAGTGACCAAACCAGAGACAACTGAAGCGGCAACACTGTCCACTT
CTCACATACGTACACGGCGCATCACTGCTGCTTTGGCTGCTGCTGCAACACCAGAAGAAA
GTCAAAGTGCAAAGAGAGCTGTGAGTGGTGACTCTCCAGTGTCAACTAGTG
| Pfam |
N-CoR_GPS2_interact (IPR031557) - T[260-336] 2.5E-19 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[519-582] 1.4E-12 - T[647-698] 3.81E-11 |
| ProSiteProfiles |
SANT_dom (IPR017884) - T[529-580] 18.338 - T[646-697] 15.659 |
| SMART |
SANT/Myb (IPR001005) - T[530-578] 8.8E-6 - T[647-695] 2.8E-11 |
| Pfam |
SANT/Myb (IPR001005) - T[648-693] 3.3E-9 |
| CDD |
SANT/Myb (IPR001005) - T[650-693] 1.48225E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NCOR1_HUMAN | 58.491 % | 387 | 9.38E-116 |
| NCOR2_HUMAN | 57.053 % | 390 | 9.62E-117 |