- Transcript 'KH2012:KH.C10.560.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.560.v1.B.nonSL3-1
Possible name(s)
NCOR1; NCOR2; RCOR3
Gene model
Location
KhC10 [2,104,362 / 2,115,418]
Amino acid sequence
Length: 825
>KH.C10.560.v1.B.nonSL3-1
SMKPPWQSQHHVATSGNNPHHPTSRIETSQAPTSSVSDPSLVLSQLFAHQQNALHSSYLS
MYTKPDQKLPYDPRMQLPVMSASLPRSQMLGVPTPHQPLPSTNPYQQRRSAPLRVSLLRD
IDIAGERDKDTPASSGASYAYSGSALHPSQIASSSRHTQERPITMLGNMQHNYQQQQQAC
AVLSKQQDIPSFNHPSFGAQQHPAYSGLPITKEIKQEAIVVKLEEQDKGMYHPPSDNTSD
HTASQTPSVQRHAGVPTQPKQDITNPASVSYEQKSKEDLVQAMDKVDREIAKVESEINRI
QKKKTQLEESAKMPPEPEKSASSPQRVEPKHRDLWQVIYAENRKKAEAARVVLDGLCPRY
DMPLYNQPCDTKVYQQNLKKNEEMRPKLLKFFKHRSKLQNIRERYICARYDQLMQQWNNK
AERIENNVKKKAKDAKTREYFEKLFPEIRKQREQQERVDRVGTRGDSCRSDADFAQIVDG
LSEQENQLNHMRQLAVVPPMLLDRDEQRVRFISTNGFIREPFKDFKESQQLDSWAEQEKI
IFKEKFVLHPKNFNLIASFIEKKSVADCILYYYLTKKTNNYKALVRKQSMKPKKPKSGRS
HASSNNDQTGTGKDSSEKTDETKKEEEITEIKVDRPPSPRMTRARKQTMNWTEEEISLVK
EGFGKHGKDFCSISRMVTNKSEQQVKNFYHNYKKKHGLDQLITESRKKKTNESRRTRYHA
PSPDTLTTPSPDVTSSTDAKPKQEKPEEEKPFIEEEKKLADSPPSTTASTTKTVTKPETT
EAATLSTSHIRTRRITAALAAAATPEESQSAKRAVSGDSPVSTS+
Nucleotide sequence
Length: 2,573
>KH2012:KH.C10.560.v1.B.nonSL3-1
TCAGGACAAGCTTAACCGGTAGCTTCGTTTTTACTGCAACGTTAAGCCTTTACGTTAATT
TATTTGTTTATATGTGAGGACGGCGCACAATAAAGTATAAAGTATGAAACCACCATGGCA
ATCCCAACACCATGTAGCTACAAGTGGAAATAATCCACACCACCCAACATCAAGGATTGA
AACAAGTCAGGCGCCCACATCATCTGTATCTGATCCATCTCTCGTTCTCTCTCAACTTTT
TGCTCATCAACAGAATGCTCTGCATTCCTCCTACCTATCAATGTACACCAAACCAGATCA
GAAATTGCCCTATGATCCTCGGATGCAGCTCCCAGTGATGTCCGCATCACTTCCTCGTTC
CCAGATGCTCGGAGTACCCACTCCTCATCAACCACTTCCCTCCACTAATCCTTATCAACA
AAGAAGAAGTGCACCTCTTCGTGTTTCACTCCTCAGAGATATCGATATAGCAGGAGAAAG
GGATAAAGATACACCAGCTTCTTCAGGTGCTTCATATGCATACAGTGGTTCAGCCTTACA
CCCTTCTCAAATAGCAAGTAGTTCGCGCCATACACAAGAGAGACCAATTACAATGTTAGG
CAACATGCAGCACAATTATCAACAACAACAGCAAGCTTGTGCTGTTCTTTCTAAGCAACA
GGACATACCTTCATTTAATCACCCAAGTTTTGGTGCCCAGCAACATCCTGCTTATTCAGG
CTTGCCCATAACAAAAGAAATAAAACAGGAGGCAATAGTTGTGAAACTAGAAGAACAAGA
TAAAGGAATGTATCACCCACCAAGTGATAACACATCTGATCATACAGCTTCACAAACACC
TAGTGTGCAACGGCATGCAGGTGTACCTACCCAACCTAAACAAGATATAACAAACCCAGC
AAGTGTAAGTTATGAACAAAAGTCAAAGGAAGATTTGGTTCAAGCTATGGATAAAGTGGA
CCGAGAAATCGCAAAAGTTGAGAGCGAGATTAATCGCATCCAGAAGAAGAAGACACAGCT
GGAGGAGTCCGCTAAGATGCCTCCTGAGCCTGAGAAGAGCGCATCGTCACCACAGAGAGT
GGAACCAAAGCACCGAGATCTTTGGCAAGTTATTTATGCGGAAAATAGGAAAAAAGCTGA
AGCAGCACGTGTAGTGTTGGATGGGTTGTGTCCGAGGTACGACATGCCATTATATAACCA
GCCTTGTGATACTAAAGTTTATCAACAAAATCTGAAAAAAAATGAAGAAATGAGACCTAA
ACTGCTCAAGTTCTTCAAGCACCGTAGTAAGTTACAGAACATTCGTGAACGATATATTTG
TGCAAGGTATGACCAACTCATGCAACAGTGGAATAACAAAGCGGAAAGAATTGAAAACAA
TGTTAAAAAGAAGGCAAAAGATGCGAAGACACGAGAGTATTTTGAAAAACTTTTCCCGGA
GATCCGGAAGCAAAGGGAGCAACAGGAGAGAGTAGATCGTGTTGGAACGAGAGGAGACTC
TTGCAGAAGTGATGCAGATTTCGCTCAGATCGTGGATGGCTTGTCAGAACAAGAAAACCA
ACTGAACCACATGAGGCAATTGGCAGTAGTACCTCCCATGTTGTTGGATAGAGATGAGCA
GAGAGTCAGGTTCATAAGCACCAATGGATTTATAAGGGAACCTTTCAAAGATTTCAAGGA
GAGTCAGCAGCTCGACTCGTGGGCTGAACAAGAGAAGATAATATTCAAAGAAAAATTTGT
TTTACATCCAAAGAACTTCAATCTTATTGCTTCCTTTATTGAAAAAAAGAGTGTGGCAGA
CTGCATTCTTTATTATTACCTTACAAAGAAAACGAACAACTACAAAGCTCTGGTTCGAAA
ACAAAGCATGAAACCTAAGAAACCAAAATCGGGTCGTTCTCATGCATCAAGCAATAATGA
TCAAACTGGTACTGGAAAAGATTCATCCGAAAAAACCGACGAGACAAAAAAAGAAGAGGA
AATTACTGAAATAAAAGTGGACCGACCCCCCTCACCAAGAATGACAAGGGCACGAAAACA
GACAATGAATTGGACGGAGGAAGAAATATCTTTGGTTAAGGAAGGGTTTGGAAAGCATGG
GAAAGATTTCTGTTCCATCTCACGCATGGTTACCAATAAGTCAGAACAACAAGTCAAGAA
TTTTTACCACAATTACAAGAAGAAACATGGCTTGGATCAACTTATAACTGAGAGCAGGAA
AAAGAAGACGAACGAATCTCGACGAACTCGTTACCACGCCCCGTCTCCTGACACTTTAAC
AACACCAAGTCCGGATGTCACTTCATCAACCGATGCAAAACCAAAACAAGAGAAACCAGA
AGAAGAGAAACCATTCATTGAAGAAGAGAAAAAGTTGGCTGATAGCCCACCTAGCACAAC
AGCTTCCACAACTAAAACAGTGACCAAACCAGAGACAACTGAAGCGGCAACACTGTCCAC
TTCTCACATACGTACACGGCGCATCACTGCTGCTTTGGCTGCTGCTGCAACACCAGAAGA
AAGTCAAAGTGCAAAGAGAGCTGTGAGTGGTGACTCTCCAGTGTCAACTAGTG
| Pfam |
N-CoR_GPS2_interact (IPR031557) - T[260-336] 2.5E-19 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[519-582] 1.4E-12 - T[647-698] 3.81E-11 |
| ProSiteProfiles |
SANT_dom (IPR017884) - T[529-580] 18.338 - T[646-697] 15.659 |
| SMART |
SANT/Myb (IPR001005) - T[530-578] 8.8E-6 - T[647-695] 2.8E-11 |
| Pfam |
SANT/Myb (IPR001005) - T[648-693] 3.3E-9 |
| CDD |
SANT/Myb (IPR001005) - T[650-693] 1.48225E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NCOR1_HUMAN | 58.491 % | 387 | 9.38E-116 |
| NCOR2_HUMAN | 57.053 % | 390 | 9.62E-117 |