- Transcript 'Haaura.CG.MTP2014.S2...' >
- Clone 'AJ494410' >
- Transcript 'KH2012:KH.C12.370.v1...' >
- Transcript 'KH2012:KH.L9.27.v1.A...' >
- Transcript 'KH2012:KH.C10.560.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.560.v1.R.ND1-1
Possible name(s)
NCOR1; NCOR2; RCOR3
Gene model
Location
KhC10 [2,104,362 / 2,115,402]
Amino acid sequence
Length: 825
>KH.C10.560.v1.R.ND1-1
SMKPPWQSQHHVATSGNNPHHPTSRIETSQAPTSSVSDPSLVLSQLFAHQQNALHSSYLS
MYTKPDQKLPYDPRMQLPVMSASLPRSQMLGVPTPHQPLPSTNPYQQRRSAPLRVSLLRD
IDIAGERDKDTPASSGASYAYSGSALHPSQIASSSRHTQERPITMLGNMQHNYQQQQQAC
AVLSKQQDIPSFNHPSFGAQQHPAYSGLPITKEIKQEAIVVKLEEQDKGMYHPPSDNTSD
HTASQTPSVQRHAGVPTQPKQDITNPASVSYEQKSKEDLVQAMDKVDREIAKVESEINRI
QKKKTQLEESAKMPPEPEKSASSPQRVEPKHRDLWQVIYAENRKKAEAARVVLDGLCPRY
DMPLYNQPCDTKVYQQNLKKNEEMRPKLLKFFKHRSKLQNIRERYICARYDQLMQQWNNK
AERIENNVKKKAKDAKTREYFEKLFPEIRKQREQQERVDRVGTRGDSCRSDADFAQIVDG
LSEQENQLNHMRQLAVVPPMLLDRDEQRVRFISTNGFIREPFKDFKESQQLDSWAEQEKI
IFKEKFVLHPKNFNLIASFIEKKSVADCILYYYLTKKTNNYKALVRKQSMKPKKPKSGRS
HASSNNDQTGTGKDSSEKTDETKKEEEITEIKVDRPPSPRMTRARKQTMNWTEEEISLVK
EGFGKHGKDFCSISRMVTNKSEQQVKNFYHNYKKKHGLDQLITESRKKKTNESRRTRYHA
PSPDTLTTPSPDVTSSTDAKPKQEKPEEEKPFIEEEKKLADSPPSTTASTTKTVTKPETT
EAATLSTSHIRTRRITAALAAAATPEESQSAKRAVSGDSPVSTS+
Nucleotide sequence
Length: 2,557
>KH2012:KH.C10.560.v1.R.ND1-1
CGGTAGCTTCGTTTTTACTGCAACGTTAAGCCTTTACGTTAATTTATTTGTTTATATGTG
AGGACGGCGCACAATAAAGTATAAAGTATGAAACCACCATGGCAATCCCAACACCATGTA
GCTACAAGTGGAAATAATCCACACCACCCAACATCAAGGATTGAAACAAGTCAGGCGCCC
ACATCATCTGTATCTGATCCATCTCTCGTTCTCTCTCAACTTTTTGCTCATCAACAGAAT
GCTCTGCATTCCTCCTACCTATCAATGTACACCAAACCAGATCAGAAATTGCCCTATGAT
CCTCGGATGCAGCTCCCAGTGATGTCCGCATCACTTCCTCGTTCCCAGATGCTCGGAGTA
CCCACTCCTCATCAACCACTTCCCTCCACTAATCCTTATCAACAAAGAAGAAGTGCACCT
CTTCGTGTTTCACTCCTCAGAGATATCGATATAGCAGGAGAAAGGGATAAAGATACACCA
GCTTCTTCAGGTGCTTCATATGCATACAGTGGTTCAGCCTTACACCCTTCTCAAATAGCA
AGTAGTTCGCGCCATACACAAGAGAGACCAATTACAATGTTAGGCAACATGCAGCACAAT
TATCAACAACAACAGCAAGCTTGTGCTGTTCTTTCTAAGCAACAGGACATACCTTCATTT
AATCACCCAAGTTTTGGTGCCCAGCAACATCCTGCTTATTCAGGCTTGCCCATAACAAAA
GAAATAAAACAGGAGGCAATAGTTGTGAAACTAGAAGAACAAGATAAAGGAATGTATCAC
CCACCAAGTGATAACACATCTGATCATACAGCTTCACAAACACCTAGTGTGCAACGGCAT
GCAGGTGTACCTACCCAACCTAAACAAGATATAACAAACCCAGCAAGTGTAAGTTATGAA
CAAAAGTCAAAGGAAGATTTGGTTCAAGCTATGGATAAAGTGGACCGAGAAATCGCAAAA
GTTGAGAGCGAGATTAATCGCATCCAGAAGAAGAAGACACAGCTGGAGGAGTCCGCTAAG
ATGCCTCCTGAGCCTGAGAAGAGCGCATCGTCACCACAGAGAGTGGAACCAAAGCACCGA
GATCTTTGGCAAGTTATTTATGCGGAAAATAGGAAAAAAGCTGAAGCAGCACGTGTAGTG
TTGGATGGGTTGTGTCCGAGGTACGACATGCCATTATATAACCAGCCTTGTGATACTAAA
GTTTATCAACAAAATCTGAAAAAAAATGAAGAAATGAGACCTAAACTGCTCAAGTTCTTC
AAGCACCGTAGTAAGTTACAGAACATTCGTGAACGATATATTTGTGCAAGGTATGACCAA
CTCATGCAACAGTGGAATAACAAAGCGGAAAGAATTGAAAACAATGTTAAAAAGAAGGCA
AAAGATGCGAAGACACGAGAGTATTTTGAAAAACTTTTCCCGGAGATCCGGAAGCAAAGG
GAGCAACAGGAGAGAGTAGATCGTGTTGGAACGAGAGGAGACTCTTGCAGAAGTGATGCA
GATTTCGCTCAGATCGTGGATGGCTTGTCAGAACAAGAAAACCAACTGAACCACATGAGG
CAATTGGCAGTAGTACCTCCCATGTTGTTGGATAGAGATGAGCAGAGAGTCAGGTTCATA
AGCACCAATGGATTTATAAGGGAACCTTTCAAAGATTTCAAGGAGAGTCAGCAGCTCGAC
TCGTGGGCTGAACAAGAGAAGATAATATTCAAAGAAAAATTTGTTTTACATCCAAAGAAC
TTCAATCTTATTGCTTCCTTTATTGAAAAAAAGAGTGTGGCAGACTGCATTCTTTATTAT
TACCTTACAAAGAAAACGAACAACTACAAAGCTCTGGTTCGAAAACAAAGCATGAAACCT
AAGAAACCAAAATCGGGTCGTTCTCATGCATCAAGCAATAATGATCAAACTGGTACTGGA
AAAGATTCATCCGAAAAAACCGACGAGACAAAAAAAGAAGAGGAAATTACTGAAATAAAA
GTGGACCGACCCCCCTCACCAAGAATGACAAGGGCACGAAAACAGACAATGAATTGGACG
GAGGAAGAAATATCTTTGGTTAAGGAAGGGTTTGGAAAGCATGGGAAAGATTTCTGTTCC
ATCTCACGCATGGTTACCAATAAGTCAGAACAACAAGTCAAGAATTTTTACCACAATTAC
AAGAAGAAACATGGCTTGGATCAACTTATAACTGAGAGCAGGAAAAAGAAGACGAACGAA
TCTCGACGAACTCGTTACCACGCCCCGTCTCCTGACACTTTAACAACACCAAGTCCGGAT
GTCACTTCATCAACCGATGCAAAACCAAAACAAGAGAAACCAGAAGAAGAGAAACCATTC
ATTGAAGAAGAGAAAAAGTTGGCTGATAGCCCACCTAGCACAACAGCTTCCACAACTAAA
ACAGTGACCAAACCAGAGACAACTGAAGCGGCAACACTGTCCACTTCTCACATACGTACA
CGGCGCATCACTGCTGCTTTGGCTGCTGCTGCAACACCAGAAGAAAGTCAAAGTGCAAAG
AGAGCTGTGAGTGGTGACTCTCCAGTGTCAACTAGTG
| Pfam |
N-CoR_GPS2_interact (IPR031557) - T[260-336] 2.5E-19 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[519-582] 1.4E-12 - T[647-698] 3.81E-11 |
| ProSiteProfiles |
SANT_dom (IPR017884) - T[529-580] 18.338 - T[646-697] 15.659 |
| SMART |
SANT/Myb (IPR001005) - T[530-578] 8.8E-6 - T[647-695] 2.8E-11 |
| Pfam |
SANT/Myb (IPR001005) - T[648-693] 3.3E-9 |
| CDD |
SANT/Myb (IPR001005) - T[650-693] 1.48225E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NCOR1_HUMAN | 58.491 % | 387 | 9.38E-116 |
| NCOR2_HUMAN | 57.053 % | 390 | 9.62E-117 |