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- Transcript 'KH2012:KH.C10.583.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.583.v1.A.ND1-1
Possible name(s)
ABCD2; ABCD3; ABCD4
Gene model
Location
KhC10 [2,578,084 / 2,585,310]
Amino acid sequence
Length: 655
>KH.C10.583.v1.A.ND1-1
NLVPIYKVSLKPGNRASKGLRCCSKMENEVPRLGLVFFRRLWKILGIIFQRWNSRATVIF
VIFTVLSLLLQFVIYAAGLVPSKYFTVLGAKDAETFPQLAVYSILIIVLNALMKSCLTYI
SKILYLTWRQTLCGKLHLDYFKNMNYYKLNVLDNKLDNVDQRLTRDVEQFSREWSLMCGK
LVVVPFTLVYYSYQCFVSTTWIGPVTIYIYFLVGTFINRIIMAPIVRLQVEQEVKEGDFR
FQHLQVRVNAESMAFHRAGKTEQTKSNEKLRTLIKTQMSLFNWSFWLNSAVNIFDYVGGI
LSYLVIAIPIFAGNYDDLAPEEISALISKNSFVCIYLIYSFSQLIDMSSTVGDMAAHTHR
LGQLIESLDVENKDQPPEEEDSSFTYENESYSDEENILKDQSTGEEEFRVVEAMIVGDKT
GDKSFASKQPERDGVFFKLQSVSVTPPDKTATLLQSLSISLSDGKNVLITGPTGAGKTSL
LRVLAGLWPVETGSINRFLEFGKEGVMFLPQKPYLTDGTLQDQVMYPIYSLPNGINEEEN
RNHIYSIIEEVGLSDLLKGNSGSVDRKELNWSDKLSPGEAQCLAFARLFYHNPKFAVMDE
PASGLDPNMADNLYLSCMKRKITYLTVGHGSTLQKHHDEELRIYGNGDWSIITLL
Nucleotide sequence
Length: 2,369
>KH2012:KH.C10.583.v1.A.ND1-1
ATCAACAGTCGTAACTAATTTGAGTTAGAATCTTGTCCCTATTTATAAAGTGTCTCTCAA
ACCAGGAAATAGGGCAAGCAAAGGTTTACGGTGCTGCAGTAAGATGGAAAACGAAGTCCC
AAGACTTGGACTTGTATTTTTTCGCCGACTTTGGAAAATATTAGGCATAATTTTCCAGCG
TTGGAATTCCCGTGCAACTGTGATATTCGTCATCTTTACTGTGCTATCTCTGCTTTTGCA
ATTCGTGATCTATGCTGCTGGTCTTGTTCCTTCCAAATATTTTACAGTTCTTGGAGCAAA
AGATGCTGAAACTTTTCCACAGCTTGCTGTTTATTCTATTCTAATAATTGTTCTCAATGC
TTTGATGAAAAGCTGTCTTACATACATCTCAAAAATCCTATATTTAACCTGGAGACAGAC
ACTGTGTGGAAAACTTCATCTTGATTATTTTAAAAACATGAATTACTACAAGTTGAATGT
ACTGGATAATAAACTTGATAATGTTGATCAGAGGTTGACCAGAGATGTTGAGCAGTTTTC
CCGTGAATGGAGTTTAATGTGTGGAAAACTAGTTGTTGTTCCATTCACTCTTGTGTATTA
CTCATACCAGTGTTTTGTGAGCACCACATGGATTGGGCCGGTCACCATATATATCTATTT
TCTTGTTGGAACGTTTATCAATCGGATCATCATGGCTCCTATAGTCAGGCTCCAAGTGGA
ACAAGAAGTAAAGGAGGGAGATTTCAGGTTCCAGCACCTCCAAGTGCGTGTGAATGCAGA
ATCAATGGCATTTCACAGAGCTGGCAAAACTGAGCAGACAAAGAGCAACGAAAAACTTCG
TACGCTCATTAAGACACAAATGTCTTTATTTAACTGGTCTTTCTGGCTTAACTCTGCTGT
AAACATATTTGATTATGTTGGTGGGATCCTTAGTTATCTTGTTATTGCTATACCAATATT
TGCCGGAAATTATGACGACTTGGCTCCGGAAGAAATAAGTGCTCTTATAAGCAAAAACTC
CTTTGTTTGCATCTACCTTATCTACAGCTTCTCTCAATTAATTGACATGTCAAGTACTGT
GGGCGACATGGCTGCTCATACACACAGACTTGGTCAGTTGATTGAATCCTTGGATGTGGA
AAACAAGGATCAACCTCCAGAAGAAGAAGATTCTTCATTCACATACGAGAATGAATCTTA
CTCGGACGAAGAGAATATTTTAAAAGATCAATCAACTGGAGAAGAAGAATTCAGAGTTGT
TGAGGCAATGATAGTAGGAGATAAAACCGGTGATAAAAGTTTTGCGTCGAAGCAACCAGA
GAGAGATGGCGTGTTCTTTAAACTGCAAAGTGTTTCGGTCACGCCTCCAGACAAAACTGC
AACTCTATTGCAAAGTCTAAGCATCTCTTTATCTGACGGGAAAAATGTTTTAATAACTGG
TCCAACCGGTGCTGGAAAAACCTCGCTTTTACGAGTTTTAGCAGGATTATGGCCAGTTGA
GACTGGTTCTATTAACAGGTTCTTGGAATTTGGCAAAGAAGGTGTTATGTTTTTGCCTCA
AAAACCTTACCTTACGGATGGGACCTTGCAAGACCAGGTAATGTACCCTATCTACAGTCT
TCCAAATGGTATTAATGAGGAGGAAAATAGAAACCATATTTATTCCATCATTGAAGAAGT
TGGCTTGTCTGATTTGTTAAAAGGCAACAGTGGATCTGTGGACAGAAAAGAATTGAACTG
GAGTGACAAGCTATCCCCAGGTGAAGCGCAGTGCTTGGCATTTGCAAGATTGTTTTACCA
CAACCCAAAGTTTGCAGTAATGGATGAACCAGCAAGTGGTTTGGATCCAAACATGGCAGA
CAATCTATATCTGTCGTGTATGAAGCGGAAAATCACTTACTTGACTGTTGGACATGGTTC
AACTTTACAGAAGCACCATGATGAAGAACTGCGCATTTATGGAAATGGGGATTGGTCAAT
AATCACTTTACTTTAGCATCAAAAATGTTTATGATATTATGTGCAATTTAAATTTTAACT
TTTTTTTTAATTTTTGTTATTAAATTTTAGCAACGACATGGTATTGCGAGTAATTTTAAG
CTGTGTGGTGCAGCCATTATGGTACAATTGTACTCCACTGTTTTAAGGTTTACAAGTAGA
TTAGCAAGTGTTTCAAAACAGTGATTATTTGACATGTTGCATAAAGTTTCAAAGTAAATA
CATTTGTCACGTTTACTATTTGTACTTTACCTTTACTCTACCTTACGAATAATTTAAAGT
GACTTATATGAGTGCTTCAATTTTATAAATATGTATTGTGTTTTAGCAATTTTGCCTAAA
TAAATTTGTTGCATATTCTAGGCTATAAA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[28-373] 5.3E-9 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[34-311] 2.0E-67 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[39-347] 9.94E-17 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[61-316] 15.432 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[433-644] 3.88E-31 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[437-654] 14.539 |
| Pfam |
ABC_transporter-like (IPR003439) - T[454-602] 2.3E-18 |
| SMART |
AAA+_ATPase (IPR003593) - T[463-648] 3.2E-7 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[575-589] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCD4_HUMAN | 44.888 % | 538 | 0 |
| ABCD3_HUMAN | 28.051 % | 213 | 1.71E-60 |
| ABCD2_HUMAN | 24.394 % | 182 | 9.81E-49 |