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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R0.1...'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'
  3. Transcript 'Phfumi.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.C10.87.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.87.v1.A.nonSL2-1

Possible name(s)

TMED10; TMED4; TMED9

Location

KhC10 [1,798,782 / 1,800,340]

Sequences

Amino acid sequence

Length: 214

>KH.C10.87.v1.A.nonSL2-1
FAMATRAVLIFLLFVHCSYAIYFHVGEKEKKCFIEELPEDTMVTGKYKAQLWDKRSNQYL
DSTPGMGMHVEIKDPESKVLLSKSYGLDIHFPHTCEHXICIHSNSTKWSLFAGGRIRVHL
DIQVGENTNDYSQIAAKDKLTELQLRVRQLLDQVQQIQKEQNYQRYREERFRQTSENTNA
RVLWWSLAQSAVLVIAGIWQMRHLKGFFEAKKLV

Nucleotide sequence

Length: 1,083

>KH2012:KH.C10.87.v1.A.nonSL2-1
TGGATGCTAAACTAATAGTTGATTTGCCATGGCAACAAGGGCAGTCTTAATTTTCTTACT
TTTTGTTCATTGTTCGTATGCCATATATTTCCATGTTGGTGAGAAAGAAAAGAAATGTTT
CATAGAAGAGCTACCAGAAGACACAATGGTGACTGGAAAGTACAAAGCGCAACTCTGGGA
TAAGCGTTCTAATCAATATCTTGATTCAACCCCAGGAATGGGTATGCATGTTGAAATAAA
AGATCCAGAAAGTAAAGTTTTGCTTTCAAAAAGCTATGGCTTGGACATTCACTTCCCACA
CACCTGTGAACATCANATTTGCATTCACTCTAATTCAACTAAATGGTCTTTATTTGCTGG
TGGAAGGATTCGCGTTCATCTTGATATCCAAGTTGGGGAGAACACCAATGATTACAGTCA
GATTGCAGCAAAAGACAAACTGACTGAACTTCAACTTCGTGTTCGTCAACTTCTTGATCA
AGTTCAACAGATCCAGAAAGAGCAAAACTACCAACGGTACAGAGAAGAAAGGTTCAGACA
GACAAGTGAAAACACCAATGCCAGAGTTCTATGGTGGTCACTTGCACAGAGTGCAGTGCT
GGTCATTGCTGGTATCTGGCAGATGCGTCATTTGAAAGGATTTTTTGAAGCAAAAAAGTT
GGTGTAAACATTTTAATCAAAACTAGGTTGAATAGCAGGTACAACACTGCTAGACAGTTG
GGTTTAAAAAAAATTAGTCATTTGGCTCATTTATGCAGTGGATGCAATTTATGAATTTAT
GCTTTTATGCTTTGTTGATAAACTCAATAAATTGGTAGTAGGTTAGTTATGTCCTCTTGA
TGTTATTTCTTTAATTGGTATGGTTGGGGTGGGTGGAGGGCATTATACAATTTGTGTCTA
AAATAATAGGCCTAATAGTTATTATAGCAGTATGCTGTTTATTTAAAATAATTTCATCTG
TACTGTTTTAACATACCATCTAGTTGTACGAAGTATTTAAATGGATTTTTTGTTTGACTA
TAGTAGCTTTTGTGTTTTGTTGCACGAATTTCAAATTTATAAAAATATATACTTTTACTG
CAT

InterProScan

PANTHER
TMP21-related (IPR015720) - T[2-214] 3.0E-105
SMART
GOLD_dom (IPR009038) - T[20-209] 1.9E-64
Pfam
GOLD_dom (IPR009038) - T[20-209] 2.4E-46
ProSiteProfiles
GOLD_dom (IPR009038) - T[30-147] 9.022

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED9_HUMAN 65.728 % 301 8.79E-105
TMED4_HUMAN 67.839 % 300 1.07E-104
TMEDA_HUMAN 33.168 % 100 5.0E-26