Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.87.v1.A.SL4-1

Possible name(s)

TMED10; TMED4; TMED9

Gene model

KH2012:KH.C10.87

Location

KhC10 [1,798,821 / 1,800,340]

Sequences

Amino acid sequence

Length: 208

>KH.C10.87.v1.A.SL4-1
AVLIFLLFVHCSYAIYFHVGEKEKKCFIEELPEDTMVTGKYKAQLWDKRSNQYLDSTPGM
GMHVEIKDPESKVLLSKSYGLDIHFPHTCEHXICIHSNSTKWSLFAGGRIRVHLDIQVGE
NTNDYSQIAAKDKLTELQLRVRQLLDQVQQIQKEQNYQRYREERFRQTSENTNARVLWWS
LAQSAVLVIAGIWQMRHLKGFFEAKKLV

Nucleotide sequence

Length: 1,044

>KH2012:KH.C10.87.v1.A.SL4-1
GGCAGTCTTAATTTTCTTACTTTTTGTTCATTGTTCGTATGCCATATATTTCCATGTTGG
TGAGAAAGAAAAGAAATGTTTCATAGAAGAGCTACCAGAAGACACAATGGTGACTGGAAA
GTACAAAGCGCAACTCTGGGATAAGCGTTCTAATCAATATCTTGATTCAACCCCAGGAAT
GGGTATGCATGTTGAAATAAAAGATCCAGAAAGTAAAGTTTTGCTTTCAAAAAGCTATGG
CTTGGACATTCACTTCCCACACACCTGTGAACATCANATTTGCATTCACTCTAATTCAAC
TAAATGGTCTTTATTTGCTGGTGGAAGGATTCGCGTTCATCTTGATATCCAAGTTGGGGA
GAACACCAATGATTACAGTCAGATTGCAGCAAAAGACAAACTGACTGAACTTCAACTTCG
TGTTCGTCAACTTCTTGATCAAGTTCAACAGATCCAGAAAGAGCAAAACTACCAACGGTA
CAGAGAAGAAAGGTTCAGACAGACAAGTGAAAACACCAATGCCAGAGTTCTATGGTGGTC
ACTTGCACAGAGTGCAGTGCTGGTCATTGCTGGTATCTGGCAGATGCGTCATTTGAAAGG
ATTTTTTGAAGCAAAAAAGTTGGTGTAAACATTTTAATCAAAACTAGGTTGAATAGCAGG
TACAACACTGCTAGACAGTTGGGTTTAAAAAAAATTAGTCATTTGGCTCATTTATGCAGT
GGATGCAATTTATGAATTTATGCTTTTATGCTTTGTTGATAAACTCAATAAATTGGTAGT
AGGTTAGTTATGTCCTCTTGATGTTATTTCTTTAATTGGTATGGTTGGGGTGGGTGGAGG
GCATTATACAATTTGTGTCTAAAATAATAGGCCTAATAGTTATTATAGCAGTATGCTGTT
TATTTAAAATAATTTCATCTGTACTGTTTTAACATACCATCTAGTTGTACGAAGTATTTA
AATGGATTTTTTGTTTGACTATAGTAGCTTTTGTGTTTTGTTGCACGAATTTCAAATTTA
TAAAAATATATACTTTTACTGCAT

InterProScan

PANTHER	TMP21-related (IPR015720) - T[2-208] 2.5E-104
SMART	GOLD_dom (IPR009038) - T[14-203] 1.9E-64
Pfam	GOLD_dom (IPR009038) - T[14-203] 2.2E-46
ProSiteProfiles	GOLD_dom (IPR009038) - T[24-141] 9.022

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TMED9_HUMAN	65.566 %	299	5.04E-104
TMED4_HUMAN	67.839 %	300	1.14E-104
TMEDA_HUMAN	33.168 %	100	3.69E-26