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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S16...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  3. Transcript 'KH2012:KH.C1.1000.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1000.v1.A.SL1-1

Possible name(s)

PDCD6IP; PTPN23; RHPN1

Gene model

KH2012:KH.C1.1000

Location

KhC1 [786,652 / 800,436]

Sequences

Amino acid sequence

Length: 928

>KH.C1.1000.v1.A.SL1-1
LVETVLILQSKMSYEVELSRFFNIPIKRSHDVDFVKPLETFIKVTFDKTDDDLKKHIKEF
NTLRKNAVTKPLDKSATSLNLLMQYHDQLVAASRKFPFREANGVIVNFTWKDSLQKGKFL
SSTPKLSIADGDFERLCILYNIAALMSQVGSEANLQTDDGLKSAAKYFQEAAGILTFIKE
RVMSVVGNNSITSDLAPEVLNLYRCVLLGQAQECFYDKACTDASLNRKPEVLAKVAMQAS
YLYSEASKAFTEAESSYSLAGVQAMCGAKKELFECYAQYHQATAAQEGKRFGEAIARYQI
VEPMARNLHKNASEYLVNFKGKQFIEMVSTIRGTTEKDNNFIYNDVVPKTSSLSPIGKAP
IAKAKAFNEKENLGAKFTDMFSSLVPLDVHNALEAYEGRRKELVEKEVERIRELNNLVNG
VMSSFNLPAALEDMSGSDLPPSILEKSRTVIQKGGSAPIDQLLQDLPESLNRNQQILTEC
VRILNDEQSSDAELREKFGDKWRRKPSAELTVPLRQEMSKYQTIIENAQKADAIIRGKYE
DNKEGISLLCLPPDQLKNAIPSSSPVAALKGHPVVQELKQLCEQVNTLKAEREVMETELR
SASYDMTDKFMRVLAEEGCINEESISPGELDRIYQPLIEQVNDSSGRQESVLANLQRANE
QFAVLKSGGGQNKREDVLKKISAAFDRYEELTAHLREGNKFYNDLTELLLKLQPKCSDFV
FARKTEKEELLKDVQQTIVGTPASTAPNVPAYHQQQDVYAEVKKPPARPPPPTAPATQAP
PTAPQQTQVPKPAPRKSPAPAPPTPNAPAAQGPPASAPGAPGAPGAQGPPGQPYAHQQPP
YGYPGGAPPQQGYAPFPGYGAPPAAAPYPQQPPYGYPPQPGYAPQGYGAYPPQPGYPTQP
GGYPQQPQQPPQNYGNYGQQPPYYYPPQ

Nucleotide sequence

Length: 3,403

>KH2012:KH.C1.1000.v1.A.SL1-1
ATAAAAGAAGGTATATATATATTTATCCTAGCTGTTTTGACTGGTTGAAACAGTCCTTAT
TTTGCAAAGTAAAATGTCATATGAAGTCGAATTATCCAGATTCTTCAATATTCCTATTAA
ACGCTCACATGACGTTGACTTTGTTAAACCGTTGGAAACTTTCATCAAAGTTACATTTGA
CAAGACAGATGATGATTTAAAGAAACATATTAAAGAGTTCAACACACTGCGTAAAAATGC
GGTTACAAAGCCTTTGGATAAATCAGCTACATCTCTCAACTTGTTGATGCAGTATCATGA
CCAACTGGTTGCTGCATCACGGAAATTTCCGTTCCGTGAAGCAAATGGGGTGATCGTTAA
TTTCACTTGGAAGGATTCGTTGCAGAAGGGAAAGTTTCTCAGCAGCACACCCAAGCTAAG
CATAGCAGATGGTGACTTTGAGCGTCTATGTATATTATACAACATAGCAGCACTTATGTC
TCAAGTTGGAAGTGAAGCAAATCTTCAAACTGATGATGGATTGAAAAGTGCAGCAAAGTA
TTTCCAGGAAGCTGCTGGAATTCTCACCTTCATCAAAGAACGTGTGATGTCCGTCGTTGG
GAATAATTCAATCACATCAGATCTTGCCCCTGAAGTTTTGAATCTTTATCGTTGCGTGTT
GTTGGGTCAAGCACAAGAATGCTTCTATGATAAAGCTTGCACGGATGCTTCACTAAACAG
AAAGCCAGAGGTGCTTGCCAAAGTTGCAATGCAAGCTTCCTATCTTTACTCTGAAGCTTC
AAAAGCATTCACAGAAGCTGAGAGTAGTTACTCCTTGGCTGGTGTGCAAGCTATGTGTGG
TGCTAAGAAGGAACTGTTTGAGTGTTACGCCCAATACCACCAAGCCACAGCTGCTCAAGA
AGGTAAAAGATTTGGAGAAGCCATTGCAAGGTACCAGATAGTTGAACCCATGGCAAGGAA
CCTACACAAGAATGCATCGGAATATCTTGTTAACTTCAAAGGCAAACAGTTCATTGAGAT
GGTATCTACTATAAGAGGGACAACCGAGAAAGACAACAACTTCATCTACAATGATGTCGT
ACCGAAAACATCAAGTTTGTCCCCAATAGGGAAAGCCCCGATTGCGAAAGCAAAAGCGTT
TAATGAGAAAGAAAATCTGGGTGCAAAGTTTACAGATATGTTCAGCTCTCTGGTGCCCCT
TGATGTACATAACGCACTAGAGGCGTATGAAGGTCGAAGAAAGGAATTGGTTGAGAAAGA
AGTTGAAAGGATCAGGGAGCTTAACAACCTCGTGAATGGAGTGATGTCATCTTTCAACCT
CCCTGCTGCACTTGAAGATATGTCAGGTAGCGATCTTCCCCCGTCTATCCTGGAGAAATC
CCGTACTGTCATCCAGAAAGGGGGGTCCGCGCCGATTGATCAACTTTTGCAGGACCTTCC
AGAGTCGCTCAACCGAAACCAACAGATTCTTACTGAGTGCGTTCGTATTCTCAACGATGA
ACAATCCTCTGATGCTGAACTTAGGGAGAAGTTTGGAGATAAATGGAGAAGAAAGCCATC
AGCTGAACTTACTGTACCATTGAGACAAGAAATGAGCAAATACCAAACGATCATCGAAAA
CGCTCAAAAAGCTGATGCGATAATCCGTGGTAAATATGAAGACAACAAAGAAGGGATTAG
TCTTCTTTGTCTTCCTCCTGACCAACTGAAGAATGCGATCCCATCCTCAAGTCCGGTGGC
AGCTCTTAAAGGACATCCAGTTGTCCAGGAGCTGAAGCAATTATGTGAACAAGTCAACAC
ATTGAAGGCTGAGAGAGAAGTGATGGAAACTGAGCTGAGAAGTGCTTCATATGATATGAC
TGATAAGTTTATGAGGGTACTCGCTGAAGAAGGCTGTATAAACGAGGAGAGTATTTCACC
GGGTGAACTAGATCGTATTTACCAACCATTGATTGAACAAGTTAATGATTCAAGTGGGAG
GCAGGAGTCGGTGCTCGCTAATTTACAGAGAGCCAATGAACAGTTTGCTGTCTTGAAATC
TGGTGGTGGACAAAATAAACGGGAAGATGTCTTGAAGAAGATTTCAGCTGCATTTGATCG
ATATGAGGAACTAACTGCTCATTTAAGGGAAGGAAATAAGTTCTACAATGATCTAACTGA
ACTTCTACTTAAGCTGCAACCTAAATGCAGTGATTTTGTATTTGCGAGGAAAACTGAGAA
GGAAGAATTACTTAAAGACGTACAGCAAACCATAGTTGGCACTCCAGCCTCCACTGCACC
CAACGTACCTGCATACCACCAACAACAAGATGTATACGCTGAAGTAAAGAAGCCGCCAGC
AAGACCCCCACCCCCTACTGCTCCAGCCACCCAAGCACCCCCAACTGCGCCCCAGCAAAC
ACAAGTGCCTAAACCAGCCCCAAGAAAATCCCCTGCACCCGCACCACCCACCCCTAATGC
GCCAGCCGCACAAGGACCACCAGCTTCTGCCCCAGGTGCACCAGGAGCACCGGGAGCCCA
AGGACCACCAGGCCAACCATATGCTCACCAACAGCCCCCCTATGGGTACCCCGGAGGTGC
CCCACCCCAGCAAGGGTATGCCCCTTTCCCCGGCTATGGAGCCCCACCTGCAGCTGCCCC
TTACCCCCAACAACCACCGTATGGCTACCCACCCCAACCTGGGTATGCCCCGCAAGGATA
TGGGGCATACCCCCCACAACCAGGTTACCCCACCCAACCTGGGGGTTACCCCCAACAACC
CCAACAGCCCCCCCAAAATTACGGCAACTACGGACAGCAACCCCCATATTATTACCCACC
CCAGTAAATACCCTTAACATCCTATTGATTACTTTGCCCCTTCACCCTTGCACAGAAAAC
TACGGGATTAGTTTAATTCTCAAAAGTCCAGATTCAGTCTTAAATATCCCTTCAAATGTT
AATCTGTGCAATGAAAAAGTGCTAATTTATTTTCAAAACTTTCAAAGAAATTTGGCCTTC
TTCATTTTTTGCAATAAATTGTTCCAATTGACTTGTAAATACACTGAAATTACAGAATGT
GGAACTGCATTCACATTAAAACTCATTTTTTTCCTATTCTGACAAGTTTATTTTCCACTG
AATTTAAATATTAATTTAGTCCGCCACTTTTCTCAAATTTCTTGTACATTGCTCTTATAG
AGTTCAGATTAATACTTTTCAATGTAAATACTGTAGTTAACGTGCACAATCTATAATTGC
TTTCAATTTTAGTTTCTGTAGCTTTTCCGTACCATATATGGTGTAAAATATTCAATTCAT
TAATTTTTCAAATTTTCGGACTAATTTTTTTTTACAGTACAAAGCTGTAAAAATTATTTT
GATTTTGCGGTATAACAATACATGTAATAACTTCTGTGGACAC

InterProScan

Gene3D
BRO1_sf (IPR038499) - T[19-385] 1.8E-101
SMART
BRO1_dom (IPR004328) - T[20-408] 2.6E-124
ProSiteProfiles
BRO1_dom (IPR004328) - T[20-418] 53.377
Pfam
BRO1_dom (IPR004328) - T[22-404] 1.6E-101
Pfam
ALIX_V_dom (IPR025304) - T[438-726] 3.3E-97

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PDC6I_HUMAN 37.709 % 590 0
PTN23_HUMAN 24.694 % 219 1.03E-58