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- Transcript 'KH2012:KH.C1.1021.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1021.v1.A.ND1-1
Possible name(s)
OGT; PEX5; PEX5L
Gene model
Location
KhC1 [5,149,159 / 5,157,592]
Amino acid sequence
Length: 632
>KH.C1.1021.v1.A.ND1-1
SLPTYRGCSAQVLLSSKMSVLKDLVAGDCGTSNALVHASQHFKHDQAFQHEGLRRPDFRS
DEQGFVDEFLSEQHSRRHVQPRTFNMDALLHEMQRLQQPTIHPHSGIPDVRSQEWSNEFT
RTLHQPATVKHKDEDAAWAHEFLQHSNVPLHEQFTNEFVEQSRVHELEQSWIKELDETEQ
RSSSELKEAAANMVKSAAYDPKLSSTNFMKFVADISKGGDGETWANEFMQNSEVSPSKLS
EMWSSEFLQQDRKLNADVWTDEFVEQSATTVVDDDNDFLDHWNDELQHGNDDWLQEFETA
NTQVKYDFKEENPFKDLKNCFEEGLKRLRLGDLPNAVLLFEAAVQSEPDHIEAWQHLGTT
QAQNEQEGAAISALHRCLTLEPENLPALMALAVSETNESMQAQACQTLKKWIYAHPKYKD
LKSNPREHNIEQVESGVHHWTGSVANSDLFHDVQDLYIQAARLSPTNPDPDVQCGLGVLF
NISNGYDKAIDCFQAALAVRPDDPLLWNKLGATLANGNKSEQAVQAYRRALELNPGFIRS
RYNLGISCINLGAHKEAVEHFLTALNVQQSGRGPKGEVGRMSDNIWSTLRMAVSFMRDDQ
SYELANNRDLDALSRKFGIDRNVQTSSPEPTT
Nucleotide sequence
Length: 2,017
>KH2012:KH.C1.1021.v1.A.ND1-1
GTCATTGCCTACATACCGTGGTTGTTCAGCACAGGTTTTACTTTCATCTAAAATGTCTGT
CTTAAAAGACCTTGTAGCCGGAGATTGTGGAACGTCAAATGCATTAGTTCATGCAAGTCA
ACATTTTAAACATGATCAGGCATTCCAACATGAAGGTTTGAGAAGGCCAGATTTTCGTTC
GGATGAACAAGGTTTCGTGGATGAGTTTTTGTCCGAACAACATTCTCGTCGACATGTTCA
ACCAAGGACCTTCAATATGGATGCACTGTTGCATGAAATGCAGCGTTTACAGCAACCAAC
CATACACCCCCACTCTGGTATACCAGATGTTCGATCACAAGAATGGAGTAATGAGTTTAC
GAGAACGCTTCATCAACCTGCTACTGTGAAACATAAAGATGAAGATGCAGCTTGGGCCCA
CGAATTTTTGCAACACTCTAATGTTCCACTTCATGAACAATTTACAAACGAGTTTGTAGA
GCAATCTCGTGTTCACGAACTTGAGCAATCGTGGATCAAAGAGTTGGATGAAACAGAGCA
AAGATCTTCATCTGAATTAAAAGAAGCTGCAGCAAACATGGTCAAGTCGGCAGCTTATGA
TCCAAAATTATCTTCCACTAATTTTATGAAGTTTGTTGCTGACATATCTAAGGGGGGTGA
CGGTGAGACGTGGGCCAACGAGTTTATGCAAAACAGTGAGGTTTCACCATCTAAGTTATC
AGAAATGTGGTCGAGTGAATTCTTGCAGCAGGATCGCAAGTTAAACGCTGATGTTTGGAC
GGACGAGTTTGTTGAACAATCTGCAACAACCGTTGTGGATGACGATAATGATTTTCTTGA
TCATTGGAATGATGAACTGCAGCATGGGAATGATGATTGGTTGCAAGAATTTGAAACAGC
CAACACACAGGTTAAATATGATTTTAAAGAAGAAAATCCATTCAAAGATCTGAAGAATTG
TTTTGAGGAAGGTTTGAAGAGGTTGAGACTCGGTGATCTTCCAAACGCTGTTCTTCTGTT
TGAAGCCGCAGTTCAAAGTGAACCGGATCATATTGAGGCATGGCAACATCTCGGAACCAC
ACAAGCACAAAATGAACAGGAAGGTGCAGCAATAAGTGCTTTGCACAGATGTCTAACATT
GGAACCTGAGAACCTTCCTGCATTGATGGCGCTTGCTGTGAGTGAAACAAATGAATCCAT
GCAAGCTCAAGCATGCCAGACACTTAAGAAGTGGATTTATGCTCATCCTAAATATAAAGA
CTTAAAAAGCAATCCACGTGAACATAATATTGAACAAGTTGAATCAGGTGTTCATCATTG
GACTGGTAGTGTGGCAAACAGTGATCTGTTCCATGACGTGCAAGACTTATACATACAAGC
TGCCAGGTTGTCACCCACCAACCCTGATCCCGATGTGCAGTGTGGACTTGGTGTTTTGTT
CAATATATCGAATGGATACGATAAAGCTATTGATTGCTTTCAAGCAGCATTAGCTGTAAG
ACCCGACGATCCATTATTATGGAACAAACTTGGTGCTACGCTTGCGAATGGAAACAAATC
TGAACAAGCAGTGCAAGCTTATAGAAGAGCTCTTGAATTAAATCCTGGATTCATCAGATC
AAGATACAACCTGGGCATCAGTTGTATTAACCTTGGTGCACATAAGGAAGCAGTTGAACA
TTTCCTCACAGCATTAAACGTTCAACAAAGTGGTCGTGGACCAAAGGGTGAAGTAGGTCG
TATGTCTGATAACATTTGGTCAACCCTTCGTATGGCTGTTTCATTCATGCGTGATGATCA
ATCATATGAGCTCGCGAATAATCGTGATCTGGACGCTCTCTCACGAAAATTTGGAATTGA
TCGAAACGTGCAAACATCAAGTCCTGAACCGACAACCTGATCGGAATTTCAACTAATTGA
TCTTTTTTCTTTCCTATTCTTCTAATTACTTCAATTTTGTAATTGCATTCTATTCTTTAT
CGTAAAGACTTCTATCTTAATAAAAATTGAAACATTT
| PANTHER |
PTS1R_family (IPR024111) - T[18-618] 3.2E-184 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[296-621] 5.7E-132 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[305-619] 2.5E-110 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[317-571] 29.169 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[317-350] 7.11 - T[351-384] 9.145 - T[470-503] 10.178 - T[504-537] 10.886 - T[538-571] 7.434 |
| SMART |
TPR_repeat (IPR019734) - T[317-350] 260.0 - T[351-384] 0.21 - T[470-503] 0.0015 - T[504-537] 2.2E-4 - T[538-571] 1.2 |
| Pfam |
TPR_repeat (IPR019734) - T[352-384] 0.19 - T[539-568] 0.2 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PEX5_HUMAN | 44.257 % | 499 | 4.77E-170 |
| PEX5R_HUMAN | 48.329 % | 337 | 1.48E-107 |