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TRANSCRIPT CARD

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  1. Clone 'cien84557' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C1.1049.v2...'

Transcript Model

Transcript Id

KH2012:KH.C1.1049.v2.A.nonSL3-1

Possible name(s)

CLDN14; CLDN18; CLDN19

Gene model

KH2012:KH.C1.1049

Location

KhC1 [3,527,163 / 3,529,646]

Sequences

Amino acid sequence

Length: 229

>KH.C1.1049.v2.A.nonSL3-1
NLGMYGQILIFVLAFVSTSLITTTTVWNQWAVNGPTSSSVLTAIWAWRGIWGDCMQMYGG
QYQCEEMQSMLNEKGYILAIRAMMCIALSLSVIGCFVTLIGMECSKLLDGNLSAKRNLMR
ISGVLFLVAGVLTLASVSWYTGVVVEDFFSVFTQDNMIIYEMGAALYLGFVSSALALLTA
ILCFCMPGPKPEDEDSPPYKYTPTGYTVREPYETKVQIPKSKDKYSEYV

Nucleotide sequence

Length: 972

>KH2012:KH.C1.1049.v2.A.nonSL3-1
AGACGTAGAATTTAGGCATGTATGGGCAAATACTCATTTTCGTATTGGCGTTTGTATCAA
CATCGTTAATTACGACCACTACTGTTTGGAATCAATGGGCTGTGAATGGTCCAACTAGTT
CTAGTGTGCTTACTGCAATTTGGGCGTGGCGTGGAATATGGGGTGATTGCATGCAAATGT
ACGGCGGACAATATCAATGTGAAGAAATGCAATCAATGCTCAACGAAAAAGGTTACATTC
TCGCAATACGGGCAATGATGTGCATCGCGCTCTCACTATCGGTGATTGGCTGCTTTGTTA
CTTTAATCGGTATGGAATGTTCGAAATTATTGGACGGCAATCTTTCTGCGAAGCGGAATC
TTATGCGCATTTCTGGAGTTTTATTTCTTGTTGCTGGAGTTCTAACTCTTGCATCGGTGT
CATGGTACACTGGAGTTGTGGTTGAGGATTTCTTTTCCGTTTTCACGCAAGATAATATGA
TCATATACGAAATGGGTGCGGCGCTGTATCTTGGATTCGTCAGCAGTGCACTAGCTCTTC
TAACAGCAATACTCTGCTTCTGCATGCCTGGACCTAAACCGGAAGATGAGGATTCGCCCC
CTTACAAATATACGCCAACAGGTTACACTGTGCGGGAGCCTTACGAAACCAAAGTACAAA
TCCCAAAATCCAAGGACAAATATTCCGAATATGTTTGATCAAAATGGCCGAAAAGGAAAT
AAACAAATATCAACTAAACTCAGTCTATATGGAAAGAAACTAAAGCTATGTACGTTTGGT
TTCCTAAACTTTATATTATTCGGTTATAACACTTTGTGTGCGTCATTTTGCCTTTGTATA
TTTCATTGCAAGAAATGTTTTCGCTATTTTCGATACGTTTAATTTTGGAAGCGATATATA
CAGTTTCTATTTCTAAGTTTATTCAATAAAATGCATGCAGCGACTGCGTGATCGTGCTGT
TTTTTTAAAAAA

InterProScan

PANTHER
Claudin (IPR006187) - T[3-229] 6.2E-162
Pfam
PMP22/EMP/MP20/Claudin (IPR004031) - T[9-182] 2.7E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLD19_HUMAN 33.636 % 123 6.52E-35
CLD14_HUMAN 35.028 % 107 2.3E-28
CLD20_HUMAN 31.754 % 105 6.4E-28