- Clone 'cieg072e09' >
- Transcript 'KH2012:KH.C1.1077.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1077.v1.A.ND1-1
Possible name(s)
CALU; RCN2; SDF4
Gene model
Location
KhC1 [3,781,418 / 3,786,576]
Amino acid sequence
Length: 390
>KH.C1.1077.v1.A.ND1-1
LLDFYVHMQRLFVCCERFSKKYIVLAMYAVKVLFYVLLISFYLEICHCKSILMVKEKKKA
KEDGDENQVDVIPVDGEHNANRLPDVEIAPPKHLDAMKFGRDGNLNSNYHKEVFLGEEVK
KFENGEYELKEQKNQLIKMFKLIDENGDGSLDEAELSKWVLHKTKEHFSEAKQENEQKFK
ELDTDNDGNVTWNEYLTEFLSRKNYSRVEVAEKLRNKVKIEVDAKVRDEVDDVHDKWLQA
SNDGDSNMSVSEFLDFQHPETGREMLEYLVQDFLHDMDVDGDEVLTIQEYISVGSDVDVD
TQDDDWAKERRNEFRNVIDQNKDGKVTKEELKRYLDPMSEAMAQQEARQLIGFGDENFDM
KLSLKELLENSEYYTGSKLYNYARSVHDDL
Nucleotide sequence
Length: 1,631
>KH2012:KH.C1.1077.v1.A.ND1-1
ACCGGCTAGCTTTTAGATTTCTATGTACATATGCAACGTTTGTTTGTTTGTTGTGAAAGA
TTCAGTAAGAAATATATTGTACTCGCAATGTATGCAGTAAAAGTGCTTTTTTATGTTCTT
CTTATTTCATTTTATTTGGAAATATGTCACTGCAAGTCAATTTTAATGGTGAAAGAAAAA
AAGAAAGCCAAAGAAGATGGCGATGAAAATCAAGTGGATGTTATACCAGTTGACGGAGAG
CACAATGCAAATAGGTTGCCAGATGTTGAAATTGCTCCACCAAAGCATTTAGACGCAATG
AAATTTGGACGAGATGGGAACTTAAACTCAAACTACCATAAAGAAGTCTTTTTGGGGGAA
GAAGTGAAAAAGTTTGAAAATGGCGAATATGAGTTGAAAGAACAGAAGAACCAATTAATA
AAAATGTTTAAGCTAATTGATGAAAATGGCGATGGTAGTCTTGATGAAGCTGAACTATCA
AAGTGGGTACTGCACAAAACAAAAGAACATTTTAGTGAAGCAAAACAAGAGAATGAGCAA
AAGTTTAAGGAGCTAGATACAGATAATGATGGAAACGTTACATGGAATGAATACCTCACA
GAGTTTCTTAGCAGAAAAAATTACAGCAGGGTTGAAGTTGCTGAGAAACTACGAAACAAA
GTGAAGATTGAAGTTGATGCAAAAGTCCGGGATGAAGTGGATGATGTTCACGACAAGTGG
TTACAGGCATCGAACGATGGGGATTCAAACATGAGTGTGAGTGAATTTCTAGATTTTCAA
CATCCAGAAACAGGAAGGGAGATGCTTGAATATCTTGTGCAGGACTTTCTACACGACATG
GACGTCGATGGTGATGAAGTGTTGACGATCCAGGAATACATCTCTGTTGGATCAGATGTT
GATGTTGATACACAGGATGATGATTGGGCAAAAGAAAGAAGGAATGAGTTCAGGAATGTC
ATTGATCAAAATAAAGATGGGAAAGTTACAAAAGAAGAACTAAAAAGATACCTTGATCCA
ATGAGTGAAGCAATGGCTCAACAAGAAGCTAGGCAGTTGATTGGTTTTGGTGACGAAAAC
TTTGATATGAAACTGTCACTTAAAGAATTGCTTGAAAATAGTGAATACTACACTGGAAGT
AAACTGTACAATTATGCACGTAGTGTTCATGATGACCTGTGACGTTCTTATTTAAAGTAC
ATTGTGTTTTAAAGCATTTCTTTAAACTGGCACATACTCTTATTATGAAGTAAAGCTTAT
AAACTTCACATTTCTCTTTACTGTCCATGTGATATCCTATCTGTATTTACTTTCCTGAAG
TGAGGTTTTTTAACATGTGTAAAAGTTTTTGAGAGCTTAATTGGATACATATTTTTGCAA
TATATTTCTTTTTTTAATAAAAAGTTGTATTTTTAGTGCAGTAAACATACCAATATTTTT
ACTTTAAGCTTTCTGTATACTGAAGGAGCAGTAACCGTCGTTATAATGCAATATTACTGT
GCTTCTTGTATTTCTTTGATGCCATTAGAATGTATTTTTAATTCAGATTAATATGTATGT
TGAAATATATTTTTAGTTCAGATTTATATGCATGTATGTAGAAAATAGTAATACATTGCC
TGTATATTTTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[129-197] 4.21E-14 - T[229-384] 1.23E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[131-166] 12.589 - T[170-205] 9.66 - T[228-263] 5.475 - T[270-300] 6.563 - T[316-341] 9.492 |
| Pfam |
EF_hand_dom (IPR002048) - T[134-197] 4.5E-11 - T[317-333] 1.4E-4 |
| SMART |
EF_hand_dom (IPR002048) - T[135-163] 0.05 - T[174-203] 59.0 - T[269-297] 11.0 - T[313-338] 9.6 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[144-156] . - T[183-195] . - T[319-331] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RCN3_HUMAN | 28.716 % | 105 | 1.03E-25 |
| CAB45_HUMAN | 41.424 % | 248 | 1.65E-79 |
| RCN2_HUMAN | 31.293 % | 125 | 5.58E-33 |