- Transcript 'KH2012:KH.C1.1077.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1077.v2.A.ND1-1
Possible name(s)
CALU; RCN2; SDF4
Gene model
Location
KhC1 [3,781,418 / 3,786,576]
Amino acid sequence
Length: 402
>KH.C1.1077.v2.A.ND1-1
LLDFYVHMQRLFVCCERFSKKYIVLAMYAVKVLFYVLLISFYLEICHCKSILMVKEKKKA
KEDGDENQVDVIPVDGEHNANRLPDVEIAPPKHLDAMKFGRDGNLNSNYHKEVFLGEEVK
KFENGEYELKEQKNQLIKMFKLIDENGDGSLDEAELSKWVLHKTKEHFSEAKQENEQKFK
ELDTDNDGNVTWNEYLTEFLSRKNYSRVEVAEKLRNKVKIEVDAKVRDEVDDVHDKWLQA
TSLKIMQNHQNASNDGDSNMSVSEFLDFQHPETGREMLEYLVQDFLHDMDVDGDEVLTIQ
EYISVGSDVDVDTQDDDWAKERRNEFRNVIDQNKDGKVTKEELKRYLDPMSEAMAQQEAR
QLIGFGDENFDMKLSLKELLENSEYYTGSKLYNYARSVHDDL
Nucleotide sequence
Length: 1,667
>KH2012:KH.C1.1077.v2.A.ND1-1
ACCGGCTAGCTTTTAGATTTCTATGTACATATGCAACGTTTGTTTGTTTGTTGTGAAAGA
TTCAGTAAGAAATATATTGTACTCGCAATGTATGCAGTAAAAGTGCTTTTTTATGTTCTT
CTTATTTCATTTTATTTGGAAATATGTCACTGCAAGTCAATTTTAATGGTGAAAGAAAAA
AAGAAAGCCAAAGAAGATGGCGATGAAAATCAAGTGGATGTTATACCAGTTGACGGAGAG
CACAATGCAAATAGGTTGCCAGATGTTGAAATTGCTCCACCAAAGCATTTAGACGCAATG
AAATTTGGACGAGATGGGAACTTAAACTCAAACTACCATAAAGAAGTCTTTTTGGGGGAA
GAAGTGAAAAAGTTTGAAAATGGCGAATATGAGTTGAAAGAACAGAAGAACCAATTAATA
AAAATGTTTAAGCTAATTGATGAAAATGGCGATGGTAGTCTTGATGAAGCTGAACTATCA
AAGTGGGTACTGCACAAAACAAAAGAACATTTTAGTGAAGCAAAACAAGAGAATGAGCAA
AAGTTTAAGGAGCTAGATACAGATAATGATGGAAACGTTACATGGAATGAATACCTCACA
GAGTTTCTTAGCAGAAAAAATTACAGCAGGGTTGAAGTTGCTGAGAAACTACGAAACAAA
GTGAAGATTGAAGTTGATGCAAAAGTCCGGGATGAAGTGGATGATGTTCACGACAAGTGG
TTACAGGCAACTTCATTAAAAATAATGCAAAATCATCAGAATGCATCGAACGATGGGGAT
TCAAACATGAGTGTGAGTGAATTTCTAGATTTTCAACATCCAGAAACAGGAAGGGAGATG
CTTGAATATCTTGTGCAGGACTTTCTACACGACATGGACGTCGATGGTGATGAAGTGTTG
ACGATCCAGGAATACATCTCTGTTGGATCAGATGTTGATGTTGATACACAGGATGATGAT
TGGGCAAAAGAAAGAAGGAATGAGTTCAGGAATGTCATTGATCAAAATAAAGATGGGAAA
GTTACAAAAGAAGAACTAAAAAGATACCTTGATCCAATGAGTGAAGCAATGGCTCAACAA
GAAGCTAGGCAGTTGATTGGTTTTGGTGACGAAAACTTTGATATGAAACTGTCACTTAAA
GAATTGCTTGAAAATAGTGAATACTACACTGGAAGTAAACTGTACAATTATGCACGTAGT
GTTCATGATGACCTGTGACGTTCTTATTTAAAGTACATTGTGTTTTAAAGCATTTCTTTA
AACTGGCACATACTCTTATTATGAAGTAAAGCTTATAAACTTCACATTTCTCTTTACTGT
CCATGTGATATCCTATCTGTATTTACTTTCCTGAAGTGAGGTTTTTTAACATGTGTAAAA
GTTTTTGAGAGCTTAATTGGATACATATTTTTGCAATATATTTCTTTTTTTAATAAAAAG
TTGTATTTTTAGTGCAGTAAACATACCAATATTTTTACTTTAAGCTTTCTGTATACTGAA
GGAGCAGTAACCGTCGTTATAATGCAATATTACTGTGCTTCTTGTATTTCTTTGATGCCA
TTAGAATGTATTTTTAATTCAGATTAATATGTATGTTGAAATATATTTTTAGTTCAGATT
TATATGCATGTATGTAGAAAATAGTAATACATTGCCTGTATATTTTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[130-305] 2.9E-16 - T[253-396] 2.32E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[131-166] 12.589 - T[170-205] 9.66 - T[282-312] 6.563 - T[328-353] 9.492 |
| Pfam |
EF_hand_dom (IPR002048) - T[134-197] 4.7E-11 - T[329-345] 1.5E-4 |
| SMART |
EF_hand_dom (IPR002048) - T[135-163] 0.05 - T[174-203] 59.0 - T[281-309] 11.0 - T[325-350] 9.6 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[144-156] . - T[183-195] . - T[331-343] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RCN3_HUMAN | 27.597 % | 101 | 4.7E-24 |
| CAB45_HUMAN | 40 % | 244 | 9.95E-78 |
| RCN2_HUMAN | 31.229 % | 131 | 4.38E-35 |