- Transcript 'KH2012:KH.C4.76.v1.A...' >
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- Transcript 'KH2012:KH.C1.11.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v1.A.nonSL2-5
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,608,632 / 4,622,714]
Amino acid sequence
Length: 305
>KH.C1.11.v1.A.nonSL2-5
FGYIYFFAATVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSF
DTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRT
VTPKRAVSREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETR
KKRGFAFVTFADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKHKNKPGDRGPPPPEY
MRDRERDYRRSPPPPAYGHDRYGPPGYDRYGPSSAYDRYAPSSYDRGYPPPPRGSFTSTY
ELCLE
Nucleotide sequence
Length: 1,116
>KH2012:KH.C1.11.v1.A.nonSL2-5
ATTTCGGATATATTTATTTCTTTGCAGCGACGGTAAATTTTCGTTCTAAGTTAAACTTTC
AATTTTATCTTGATAGTGCGTTAACCAACATAATGAAGACAGAAGATATCGACGAGACGA
ATGGAGAAGATATCAATGAACCTGAGCAACAGCGCAAACTTTTTATTGGTGGCCTTAGCT
TTGATACAACAAATGAAAGTTTGAGTGCATACTTTACTAAATTTGGAGAAGTAACCGATT
CAGTTGTGATGATGGACCCAAAAACCAAGAAATCAAGAGGTTTCGGATTTGTCACATTTA
AAAGAATCAAAATGGTTGATGCTGTTATGAGTGAACGACCACATAAATTAGATGGAAGAA
CGGTCACACCAAAACGTGCCGTTTCCAGAGAGGATTCAGAAAAACCTGGTGCACATGCAA
CGGTAAAGAAAATTTTTGTTGGTGGAATAAAAGATGACACAACAGAACAACATCTTAAAG
ATCATTTTCGAAAATTTGGGATTGTGGAACTTGTTGAGGTGATGGAGGATAGAGAAACAA
GAAAAAAACGAGGATTTGCTTTTGTTACTTTTGCTGATCATGATCCTGTTGATAAGATTG
TCAGTCAGAAATATCACACGATTAATGGACACAACTGTGAAGTGAGAAAGGCACTTCCTA
AGAATGAACTTGACAAACATAAAAACAAACCTGGTGACAGAGGTCCACCACCACCTGAAT
ACATGAGAGACAGAGAAAGAGATTATAGAAGATCACCACCACCACCAGCATATGGACATG
ACAGATATGGACCTCCAGGTTATGATCGATACGGCCCTTCCAGTGCTTACGATCGATATG
CACCAAGCAGTTATGATCGTGGTTACCCACCTCCTCCTCGTGGCAGCTTTACAAGTACTT
ATGAACTATGCTTGGAATAAACGCGCAAGGTGAAAGTAATGCTCTCTTATTTTTATTCAA
ATCTGTTTTAAAGCACCTGCCTGCTAAACAATCAGTGTGTGAATTGCAATTATGACGCAA
ATATTCAACTTGTGAACTGCTACTATGTCATAATCAACTGCCAGGTTAAACAATTGTGAT
GATGCAATGAATCCATGTGTGAATGCCTGCTATTTC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[46-132] 6.7E-26 - T[136-217] 6.2E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[47-136] 2.82E-24 - T[138-236] 3.49E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[51-134] 16.807 - T[142-219] 16.125 |
| SMART |
RRM_dom (IPR000504) - T[52-124] 2.8E-22 - T[143-215] 3.2E-21 |
| Pfam |
RRM_dom (IPR000504) - T[53-120] 6.3E-15 - T[144-208] 2.4E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 69.663 % | 268 | 2.25E-88 |
| RA1L2_HUMAN | 69.101 % | 266 | 2.3E-88 |
| ROA3_HUMAN | 70.718 % | 265 | 2.63E-87 |