- Transcript 'KH2012:KH.C1.11.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v1.A.SL1-5
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,608,632 / 4,622,687]
Amino acid sequence
Length: 296
>KH.C1.11.v1.A.SL1-5
TVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSFDTTNESLSA
YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSR
EDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVT
FADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKHKNKPGDRGPPPPEYMRDRERDYR
RSPPPPAYGHDRYGPPGYDRYGPSSAYDRYAPSSYDRGYPPPPRGSFTSTYELCLE
Nucleotide sequence
Length: 1,089
>KH2012:KH.C1.11.v1.A.SL1-5
CGACGGTAAATTTTCGTTCTAAGTTAAACTTTCAATTTTATCTTGATAGTGCGTTAACCA
ACATAATGAAGACAGAAGATATCGACGAGACGAATGGAGAAGATATCAATGAACCTGAGC
AACAGCGCAAACTTTTTATTGGTGGCCTTAGCTTTGATACAACAAATGAAAGTTTGAGTG
CATACTTTACTAAATTTGGAGAAGTAACCGATTCAGTTGTGATGATGGACCCAAAAACCA
AGAAATCAAGAGGTTTCGGATTTGTCACATTTAAAAGAATCAAAATGGTTGATGCTGTTA
TGAGTGAACGACCACATAAATTAGATGGAAGAACGGTCACACCAAAACGTGCCGTTTCCA
GAGAGGATTCAGAAAAACCTGGTGCACATGCAACGGTAAAGAAAATTTTTGTTGGTGGAA
TAAAAGATGACACAACAGAACAACATCTTAAAGATCATTTTCGAAAATTTGGGATTGTGG
AACTTGTTGAGGTGATGGAGGATAGAGAAACAAGAAAAAAACGAGGATTTGCTTTTGTTA
CTTTTGCTGATCATGATCCTGTTGATAAGATTGTCAGTCAGAAATATCACACGATTAATG
GACACAACTGTGAAGTGAGAAAGGCACTTCCTAAGAATGAACTTGACAAACATAAAAACA
AACCTGGTGACAGAGGTCCACCACCACCTGAATACATGAGAGACAGAGAAAGAGATTATA
GAAGATCACCACCACCACCAGCATATGGACATGACAGATATGGACCTCCAGGTTATGATC
GATACGGCCCTTCCAGTGCTTACGATCGATATGCACCAAGCAGTTATGATCGTGGTTACC
CACCTCCTCCTCGTGGCAGCTTTACAAGTACTTATGAACTATGCTTGGAATAAACGCGCA
AGGTGAAAGTAATGCTCTCTTATTTTTATTCAAATCTGTTTTAAAGCACCTGCCTGCTAA
ACAATCAGTGTGTGAATTGCAATTATGACGCAAATATTCAACTTGTGAACTGCTACTATG
TCATAATCAACTGCCAGGTTAAACAATTGTGATGATGCAATGAATCCATGTGTGAATGCC
TGCTATTTC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[37-123] 6.4E-26 - T[127-208] 5.9E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[38-126] 2.96E-24 - T[129-227] 3.36E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[42-125] 16.807 - T[133-210] 16.125 |
| SMART |
RRM_dom (IPR000504) - T[43-115] 2.8E-22 - T[134-206] 3.2E-21 |
| Pfam |
RRM_dom (IPR000504) - T[44-111] 6.0E-15 - T[135-199] 2.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 69.663 % | 268 | 1.12E-88 |
| RA1L2_HUMAN | 69.101 % | 266 | 1.9E-88 |
| ROA3_HUMAN | 70.718 % | 266 | 1.77E-87 |