- Clone 'ma337k18' >
- Clone 'cslv013a06' >
- Clone 'AHC0AAA154YH24' >
- Clone 'cihA1I15S' >
- Transcript 'KH2012:KH.C1.11.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v2.A.SL1-3
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,601,056 / 4,622,687]
Amino acid sequence
Length: 463
>KH.C1.11.v2.A.SL1-3
TVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSFDTTNESLSA
YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSR
EDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVT
FADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKHKNKPGDRGPPPPEYMRDRERDYR
RSPPPPAYGHDRYGPPGYDRYGPSSAYDRYAPSSYDRGYPPPPRDYDRYGPPPREYASEY
DRYREYRDYPREYSRSSSDYYRREASYSDRPSSYDYPPREEYVSSSDRERSSALPPSTSE
RDRGYSSSHTTSHESRDTRDTRDSRDPYSRSSSSAAPEYDYSRKTEGGSNGYDYSSYMNS
SSNYGPMKSSYSSRSAGPYTSSYPSAGAAPSGSSGQYSSSARY
Nucleotide sequence
Length: 2,150
>KH2012:KH.C1.11.v2.A.SL1-3
CGACGGTAAATTTTCGTTCTAAGTTAAACTTTCAATTTTATCTTGATAGTGCGTTAACCA
ACATAATGAAGACAGAAGATATCGACGAGACGAATGGAGAAGATATCAATGAACCTGAGC
AACAGCGCAAACTTTTTATTGGTGGCCTTAGCTTTGATACAACAAATGAAAGTTTGAGTG
CATACTTTACTAAATTTGGAGAAGTAACCGATTCAGTTGTGATGATGGACCCAAAAACCA
AGAAATCAAGAGGTTTCGGATTTGTCACATTTAAAAGAATCAAAATGGTTGATGCTGTTA
TGAGTGAACGACCACATAAATTAGATGGAAGAACGGTCACACCAAAACGTGCCGTTTCCA
GAGAGGATTCAGAAAAACCTGGTGCACATGCAACGGTAAAGAAAATTTTTGTTGGTGGAA
TAAAAGATGACACAACAGAACAACATCTTAAAGATCATTTTCGAAAATTTGGGATTGTGG
AACTTGTTGAGGTGATGGAGGATAGAGAAACAAGAAAAAAACGAGGATTTGCTTTTGTTA
CTTTTGCTGATCATGATCCTGTTGATAAGATTGTCAGTCAGAAATATCACACGATTAATG
GACACAACTGTGAAGTGAGAAAGGCACTTCCTAAGAATGAACTTGACAAACATAAAAACA
AACCTGGTGACAGAGGTCCACCACCACCTGAATACATGAGAGACAGAGAAAGAGATTATA
GAAGATCACCACCACCACCAGCATATGGACATGACAGATATGGACCTCCAGGTTATGATC
GATACGGCCCTTCCAGTGCTTACGATCGATATGCACCAAGCAGTTATGATCGTGGTTACC
CACCTCCTCCTCGTGACTATGATAGATATGGTCCCCCTCCAAGGGAATATGCCAGTGAAT
ACGATCGATACAGAGAATATAGGGACTATCCTAGAGAATATTCCCGGAGTTCCTCCGATT
ACTATAGAAGGGAAGCTTCATATTCTGATCGACCATCATCGTATGACTACCCGCCTCGTG
AAGAATACGTATCATCTTCGGATAGAGAAAGATCTTCTGCTCTTCCACCGAGCACTTCGG
AGCGCGATCGGGGTTACAGCAGCTCACATACCACGTCACATGAGAGCAGGGATACTCGTG
ATACAAGGGATTCCCGTGATCCTTACTCACGAAGTTCTAGTTCAGCAGCTCCGGAATATG
ATTATTCAAGAAAAACTGAAGGTGGCAGCAATGGATATGATTATTCTTCTTACATGAACA
GCAGCAGCAACTATGGTCCCATGAAGAGCAGTTACAGTTCTCGATCCGCTGGCCCATACA
CAAGTTCTTACCCAAGCGCAGGTGCTGCTCCAAGTGGAAGCTCAGGGCAGTACAGTTCAA
GTGCACGATACTAACTAACTGTCTGCATAGACAGTGCAGCGCAGGTTTGCCCACACAAAC
ATTTGTAAATAGACGTCCTGTTTTCGAGATGACGAAATTTTGTCTCTCGGTTGAAAAAAG
TCTATAACTTGAAAAGGAGCCTCAGAATTCTCACAAGGTTGTTTCAACAAACAGTTGGGC
ATTTTATAAGAAAAAGAAGTTATATCAAAGCAAGAAGATTCCAAAGTTCAGTTAAGCATC
AAATCGCTTACGAAGCAGGTCAACTATGTTATAGTCCTTGGTAAGCATTACCAGTTTCTT
TTGCTCGCCAGTGACAATTTTAGAACTGAACAAAGTTGCACATGGTTCAGTGTAGCTTAA
CTAACAAAGCATTGGAAAGTGGATAGAACTTTTCTTTGCACCTTCAGTTAAATGTTTGTC
TGAAAGCATCAGCATTTTCACAGGAAAGGGCTTTAATAACAACCACATACTGTAGTGTTG
TACATATGTATGTATTCATGGCAATGGGATGGTTATTCAAAATAATGAAGTGAATTTTGA
GATCATTTAACCACTTTTGTTACAGGTGAATGTATTGTTATAAAGATTCTGAATTAGTAA
TACCTGCTTAACTGCCTTGGTTTTTTCACTGGTCCCCCTTTTAATTTTTTTTTGTTTATT
CCATCATGGAGGTTATAGTGTTCACTTGACCATTATCAATTACTGTTTTTATTACCAATG
AAATTTTGACCTAATTAATAAACCACCTTTTGTATAATTCCGTTAAAACA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[37-123] 1.4E-25 - T[127-208] 1.3E-23 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[38-127] 5.24E-24 - T[130-227] 7.79E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[42-125] 16.807 - T[133-210] 16.125 |
| SMART |
RRM_dom (IPR000504) - T[43-115] 2.8E-22 - T[134-206] 3.2E-21 |
| Pfam |
RRM_dom (IPR000504) - T[44-111] 1.2E-14 - T[135-198] 4.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 69.663 % | 274 | 2.29E-88 |
| RA1L2_HUMAN | 69.101 % | 272 | 1.53E-88 |
| ROA3_HUMAN | 70.718 % | 270 | 5.77E-87 |