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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.11.v1.A...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Cisavi.CG.ENS81.R30....' > 
  4. Transcript 'KH2012:KH.C1.11.v3.A...'

Transcript Model

Transcript Id

KH2012:KH.C1.11.v3.A.SL1-4

Possible name(s)

HNRNPA1; HNRNPA1L2; HNRNPA3

Gene model

KH2012:KH.C1.11

Location

KhC1 [4,618,709 / 4,622,687]

Sequences

Amino acid sequence

Length: 123

>KH.C1.11.v3.A.SL1-4
TVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSFDTTNESLSA
YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMDFNEGVFPESCKRVFGFLFKIKYGN
ILL

Nucleotide sequence

Length: 506

>KH2012:KH.C1.11.v3.A.SL1-4
CGACGGTAAATTTTCGTTCTAAGTTAAACTTTCAATTTTATCTTGATAGTGCGTTAACCA
ACATAATGAAGACAGAAGATATCGACGAGACGAATGGAGAAGATATCAATGAACCTGAGC
AACAGCGCAAACTTTTTATTGGTGGCCTTAGCTTTGATACAACAAATGAAAGTTTGAGTG
CATACTTTACTAAATTTGGAGAAGTAACCGATTCAGTTGTGATGATGGACCCAAAAACCA
AGAAATCAAGAGGTTTCGGATTTGTCACATTTAAAAGAATCAAAATGGATTTCAATGAAG
GGGTATTCCCAGAATCCTGTAAAAGAGTTTTTGGCTTTTTATTTAAAATCAAATACGGAA
ACATTCTCTTGTAATTCGACATTGCTCTTGTAATTGGACACCACCTGTGATTCGATACGG
GCAAATGCACTGATGTTTCGATTCGTTACTTGCGAGAGAGCAAATTTACAAAGAAGGAAA
AATAATTAAACAGAAAGATATGCTGA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-100] 2.9E-20
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[38-92] 1.75E-19
ProSiteProfiles
RRM_dom (IPR000504) - T[42-91] 14.198
SMART
RRM_dom (IPR000504) - T[43-110] 1.1E-12
Pfam
RRM_dom (IPR000504) - T[44-92] 2.3E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ROA1_HUMAN 62.903 % 85.5 7.58E-21
RA1L2_HUMAN 65.517 % 84.3 1.11E-20
ROA3_HUMAN 67.241 % 85.9 5.44E-21