- Clone 'ma208a11' >
- Clone 'CCAO9303' >
- Clone 'cima857093' >
- Transcript 'KH2012:KH.C1.11.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v4.A.nonSL2-1
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,613,724 / 4,622,714]
Amino acid sequence
Length: 203
>KH.C1.11.v4.A.nonSL2-1
FGYIYFFAATVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSF
DTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRT
VTPKRAVSREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETR
KKRGFAFVTFADHDPVDKIVSKL
Nucleotide sequence
Length: 926
>KH2012:KH.C1.11.v4.A.nonSL2-1
ATTTCGGATATATTTATTTCTTTGCAGCGACGGTAAATTTTCGTTCTAAGTTAAACTTTC
AATTTTATCTTGATAGTGCGTTAACCAACATAATGAAGACAGAAGATATCGACGAGACGA
ATGGAGAAGATATCAATGAACCTGAGCAACAGCGCAAACTTTTTATTGGTGGCCTTAGCT
TTGATACAACAAATGAAAGTTTGAGTGCATACTTTACTAAATTTGGAGAAGTAACCGATT
CAGTTGTGATGATGGACCCAAAAACCAAGAAATCAAGAGGTTTCGGATTTGTCACATTTA
AAAGAATCAAAATGGTTGATGCTGTTATGAGTGAACGACCACATAAATTAGATGGAAGAA
CGGTCACACCAAAACGTGCCGTTTCCAGAGAGGATTCAGAAAAACCTGGTGCACATGCAA
CGGTAAAGAAAATTTTTGTTGGTGGAATAAAAGATGACACAACAGAACAACATCTTAAAG
ATCATTTTCGAAAATTTGGGATTGTGGAACTTGTTGAGGTGATGGAGGATAGAGAAACAA
GAAAAAAACGAGGATTTGCTTTTGTTACTTTTGCTGATCATGATCCTGTTGATAAGATTG
TCAGTAAGTTATAACAATCACTTATCCCTCTGGATTAATTACAACTTGGTTTTTATTTGT
TTTTGTGTTTGGTTATTATTTACTGTTTACCCCTTTAACTGTCGCTTATTTTCTTAGTTC
CTAATTTTTTTACAAAGTCTTATTCAATTGGATTTTGCAAAACTAAAGCAGTTGATCAGA
ACATGCTATATGAAATCTGTAGACTATGAAATGTTCTTCTACTTCATATTTTATTTTATT
TTAAAGATGAATAAACTTTTTCAATATCAAATATATCAAGAATGAAGAGAAATATTCAAA
AGAGATGCATTGCAAACTTGTTCAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[46-132] 2.9E-26 - T[136-203] 1.6E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[47-202] 5.71E-46 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[51-134] 16.807 - T[142-203] 16.006 |
| SMART |
RRM_dom (IPR000504) - T[52-124] 2.8E-22 - T[143-203] 6.7E-8 |
| Pfam |
RRM_dom (IPR000504) - T[53-120] 3.0E-15 - T[144-203] 3.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 67.296 % | 229 | 7.84E-75 |
| RA1L2_HUMAN | 67.742 % | 226 | 4.03E-74 |
| ROA3_HUMAN | 69.62 % | 228 | 2.89E-74 |