- Transcript 'KH2012:KH.C1.11.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v4.A.SL1-1
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,613,724 / 4,622,687]
Amino acid sequence
Length: 194
>KH.C1.11.v4.A.SL1-1
TVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSFDTTNESLSA
YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSR
EDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVT
FADHDPVDKIVSKL
Nucleotide sequence
Length: 899
>KH2012:KH.C1.11.v4.A.SL1-1
CGACGGTAAATTTTCGTTCTAAGTTAAACTTTCAATTTTATCTTGATAGTGCGTTAACCA
ACATAATGAAGACAGAAGATATCGACGAGACGAATGGAGAAGATATCAATGAACCTGAGC
AACAGCGCAAACTTTTTATTGGTGGCCTTAGCTTTGATACAACAAATGAAAGTTTGAGTG
CATACTTTACTAAATTTGGAGAAGTAACCGATTCAGTTGTGATGATGGACCCAAAAACCA
AGAAATCAAGAGGTTTCGGATTTGTCACATTTAAAAGAATCAAAATGGTTGATGCTGTTA
TGAGTGAACGACCACATAAATTAGATGGAAGAACGGTCACACCAAAACGTGCCGTTTCCA
GAGAGGATTCAGAAAAACCTGGTGCACATGCAACGGTAAAGAAAATTTTTGTTGGTGGAA
TAAAAGATGACACAACAGAACAACATCTTAAAGATCATTTTCGAAAATTTGGGATTGTGG
AACTTGTTGAGGTGATGGAGGATAGAGAAACAAGAAAAAAACGAGGATTTGCTTTTGTTA
CTTTTGCTGATCATGATCCTGTTGATAAGATTGTCAGTAAGTTATAACAATCACTTATCC
CTCTGGATTAATTACAACTTGGTTTTTATTTGTTTTTGTGTTTGGTTATTATTTACTGTT
TACCCCTTTAACTGTCGCTTATTTTCTTAGTTCCTAATTTTTTTACAAAGTCTTATTCAA
TTGGATTTTGCAAAACTAAAGCAGTTGATCAGAACATGCTATATGAAATCTGTAGACTAT
GAAATGTTCTTCTACTTCATATTTTATTTTATTTTAAAGATGAATAAACTTTTTCAATAT
CAAATATATCAAGAATGAAGAGAAATATTCAAAAGAGATGCATTGCAAACTTGTTCAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[37-123] 2.6E-26 - T[127-194] 1.4E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[38-193] 4.89E-46 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[42-125] 16.807 - T[133-194] 16.006 |
| SMART |
RRM_dom (IPR000504) - T[43-115] 2.8E-22 - T[134-194] 6.7E-8 |
| Pfam |
RRM_dom (IPR000504) - T[44-111] 2.7E-15 - T[135-194] 3.4E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 67.296 % | 229 | 5.05E-75 |
| RA1L2_HUMAN | 67.742 % | 226 | 2.57E-74 |
| ROA3_HUMAN | 69.62 % | 228 | 1.44E-74 |