- Clone 'mae33a12' >
- Transcript 'KH2012:KH.C11.720.v1...' >
- Transcript 'KH2012:KH.C9.404.v2....' >
- Transcript 'KH2012:KH.C1.11.v3.A...' >
- Transcript 'KH2012:KH.C1.11.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.11.v5.A.SL1-2
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
KhC1 [4,603,459 / 4,622,687]
Amino acid sequence
Length: 365
>KH.C1.11.v5.A.SL1-2
TVNFRSKLNFQFYLDSALTNIMKTEDIDETNGEDINEPEQQRKLFIGGLSFDTTNESLSA
YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSR
EDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVT
FADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKHKNKPGDRGPPPPEYMRDRERDYR
RSPPPPAYGHDRYGPPGYDRYGPSSAYDRYAPSSYDRGYPPPPRDYDRYGPPPREYASEY
DRYREYRDYPREYSRSSSDYYRREASYSDRPSSYDYPPREDLNVSHHEGAFHVGMFSTNA
NEIGT
Nucleotide sequence
Length: 1,400
>KH2012:KH.C1.11.v5.A.SL1-2
CGACGGTAAATTTTCGTTCTAAGTTAAACTTTCAATTTTATCTTGATAGTGCGTTAACCA
ACATAATGAAGACAGAAGATATCGACGAGACGAATGGAGAAGATATCAATGAACCTGAGC
AACAGCGCAAACTTTTTATTGGTGGCCTTAGCTTTGATACAACAAATGAAAGTTTGAGTG
CATACTTTACTAAATTTGGAGAAGTAACCGATTCAGTTGTGATGATGGACCCAAAAACCA
AGAAATCAAGAGGTTTCGGATTTGTCACATTTAAAAGAATCAAAATGGTTGATGCTGTTA
TGAGTGAACGACCACATAAATTAGATGGAAGAACGGTCACACCAAAACGTGCCGTTTCCA
GAGAGGATTCAGAAAAACCTGGTGCACATGCAACGGTAAAGAAAATTTTTGTTGGTGGAA
TAAAAGATGACACAACAGAACAACATCTTAAAGATCATTTTCGAAAATTTGGGATTGTGG
AACTTGTTGAGGTGATGGAGGATAGAGAAACAAGAAAAAAACGAGGATTTGCTTTTGTTA
CTTTTGCTGATCATGATCCTGTTGATAAGATTGTCAGTCAGAAATATCACACGATTAATG
GACACAACTGTGAAGTGAGAAAGGCACTTCCTAAGAATGAACTTGACAAACATAAAAACA
AACCTGGTGACAGAGGTCCACCACCACCTGAATACATGAGAGACAGAGAAAGAGATTATA
GAAGATCACCACCACCACCAGCATATGGACATGACAGATATGGACCTCCAGGTTATGATC
GATACGGCCCTTCCAGTGCTTACGATCGATATGCACCAAGCAGTTATGATCGTGGTTACC
CACCTCCTCCTCGTGACTATGATAGATATGGTCCCCCTCCAAGGGAATATGCCAGTGAAT
ACGATCGATACAGAGAATATAGGGACTATCCTAGAGAATATTCCCGGAGTTCCTCCGATT
ACTATAGAAGGGAAGCTTCATATTCTGATCGACCATCATCGTATGACTACCCGCCTCGTG
AAGATTTGAATGTCTCCCATCACGAAGGGGCTTTTCATGTTGGCATGTTTTCTACAAATG
CCAACGAAATAGGCACGTGATAATGTGAATGATTGTTTAAATGTTATCTGGGGTGGTCAA
ACTGCCACCCTACAACCAAGGGTTTTAACGCATGTGCAGTGGACTTAATATTTACATTGA
CGGTAGATAATCTGGGAAGAGTTGAACGCTTCCAGGCTCTGTCTTTGTAGTGCTAGAGCG
CCTCTAAATGGCGTAGATTCTTAGCTACACCGTCATAAATCATCTTACATGTTCTTCAAC
TAACATTTTTTTAGTTATTAAAAAATAGGTTGGAAACTAAAAAGTCAATGCATATTCCTT
ACACCTCTTTTAGTCACTTG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[37-123] 9.3E-26 - T[127-208] 8.5E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[38-127] 3.76E-24 - T[128-227] 3.9E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[42-125] 16.807 - T[133-210] 16.125 |
| SMART |
RRM_dom (IPR000504) - T[43-115] 2.8E-22 - T[134-206] 3.2E-21 |
| Pfam |
RRM_dom (IPR000504) - T[44-111] 8.5E-15 - T[135-199] 3.2E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 69.663 % | 269 | 6.44E-88 |
| RA1L2_HUMAN | 69.101 % | 268 | 5.54E-88 |
| ROA3_HUMAN | 70.718 % | 266 | 7.56E-87 |