Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.1105.v1.A.ND1-1

Possible name(s)

CTSD; CTSE; NAPSA

Gene model

KH2012:KH.C1.1105

Location

KhC1 [3,111,710 / 3,122,927]

Sequences

Amino acid sequence

Length: 367

>KH.C1.1105.v1.A.ND1-1
RIKLRKQKTLRQYMKEKGTSPSKYTQHWARQTSNEPLTNYMDAQYFGEISIGTPEQTFTV
IFDTGSSNLWVPSASCPSTNYACMTHNKYNSAASSTYVADGEEFRIQYGTGSMVGYDSVD
TVKIAGVPSTSQTFAEALEEPGITFVAAKFDGILGMGYPNIAVNGMKPVFNQMFEQGAVD
QNLFAFYLNRDPEAADGGEITLGGVNPARYVGDFNYHDVTRQGYWQIKMDGLSIADTAKT
TACNGGCQVIVDSGTSLITGPSADTDAINQAIGAIKFVQGEYLVICRRIPEMPDITFVLD
GIEYVLTPQDYVIQMTADGQTQCLSAFMGMDIPEPTGPLWILGDAFMGKFYTSFDFGTNQ
VGFAKLA

Nucleotide sequence

Length: 1,333

>KH2012:KH.C1.1105.v1.A.ND1-1
CTCTTTTAGTGTTTAAAATTGTTTCCAATTTGCAGCAGAAAAGTAATGAAACAATGTAAT
TTGTGTCAACTACCATTATATTTCAAGTTTAAAGGATCAAACTGCGCAAGCAGAAAACCC
TCCGTCAATACATGAAGGAGAAGGGAACCAGCCCATCGAAGTACACCCAACACTGGGCAA
GACAAACATCGAACGAACCACTCACCAACTACATGGACGCCCAATACTTCGGCGAGATCT
CCATTGGAACTCCGGAGCAGACATTCACCGTCATTTTTGACACTGGTTCATCTAACCTTT
GGGTTCCATCTGCTAGCTGCCCATCAACCAACTATGCTTGCATGACACACAACAAATACA
ACTCCGCCGCTTCATCAACTTACGTTGCTGATGGTGAAGAGTTCAGGATTCAGTACGGAA
CTGGCTCCATGGTTGGATACGACAGCGTCGACACTGTTAAGATCGCCGGTGTCCCATCCA
CCAGCCAAACCTTTGCTGAGGCATTAGAAGAACCAGGCATTACATTTGTTGCTGCCAAAT
TCGACGGTATTCTTGGCATGGGTTACCCCAACATTGCAGTCAACGGCATGAAACCAGTCT
TCAACCAAATGTTCGAGCAAGGAGCTGTTGACCAGAATCTTTTCGCGTTTTATTTGAACA
GAGACCCGGAAGCTGCTGATGGTGGTGAAATCACTCTTGGCGGAGTTAACCCAGCAAGAT
ACGTTGGCGACTTCAACTACCACGATGTCACTCGTCAAGGATACTGGCAAATAAAAATGG
ACGGTTTGAGCATTGCCGATACAGCAAAAACCACTGCATGCAATGGTGGATGCCAAGTTA
TTGTCGATTCTGGCACTTCTCTCATTACTGGACCATCCGCAGACACTGATGCTATTAACC
AAGCTATCGGAGCAATCAAGTTTGTCCAAGGAGAGTACTTGGTTATCTGCAGAAGAATCC
CAGAAATGCCCGACATTACTTTTGTATTGGACGGTATTGAATATGTGCTTACTCCACAAG
ATTACGTTATCCAGATGACCGCTGACGGACAGACGCAATGTTTGTCTGCATTCATGGGCA
TGGACATCCCAGAACCAACAGGTCCATTGTGGATTCTTGGTGACGCTTTCATGGGCAAAT
TTTATACCAGCTTCGATTTCGGTACCAATCAAGTCGGATTCGCCAAACTTGCTTAATTAT
ATACAAGCACTCGCAATTGATGCAAAATAAAATTTAATTCTAAAAGTGTCTTTGTTTTTT
ATGATGGATATCAAATATTTTGCAGTTTTTTTTCAAACTTTCTTGCCGTTATATTAAAGT
TGACACTATTTCA

InterProScan

Gene3D	Peptidase_aspartic_dom_sf (IPR021109) - T[1-204] 4.7E-67 - T[205-276] 2.0E-18 - T[280-365] 1.8E-31
SUPERFAMILY	Peptidase_aspartic_dom_sf (IPR021109) - T[2-365] 1.47E-119
PANTHER	Aspartic_peptidase_A1 (IPR001461) - T[13-365] 2.3E-134
Pfam	PEPTIDASE_A1 (IPR033121) - T[44-365] 2.9E-115
ProSiteProfiles	PEPTIDASE_A1 (IPR033121) - T[45-364] 77.394
PRINTS	Aspartic_peptidase_A1 (IPR001461) - T[51-71] 1.7E-25 - T[198-211] 1.7E-25 - T[249-260] 1.7E-25 - T[340-355] 1.7E-25
ProSitePatterns	Aspartic_peptidase_AS (IPR001969) - T[60-71] . - T[249-260] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CATD_HUMAN	50.256 %	396	2.93E-137
CATE_HUMAN	47.123 %	346	1.16E-117
NAPSA_HUMAN	47.904 %	343	2.27E-116