- Transcript 'KH2012:KH.C1.1109.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1109.v1.A.SL1-1
Possible name(s)
MGAM2; MUC6
Gene model
Location
KhC1 [1,651,461 / 1,660,266]
Amino acid sequence
Length: 967
>KH.C1.1109.v1.A.SL1-1
LQCFFFEMTRIQIPLVVLFVLLLQQECFSKFVWKMSSDLSKEWTHGRLKAFESGEFEEEI
EESEVREVEEEGEEEKEMFNVPCAAECSTAYGRRVSCEYTGKSEKKCLSRNCCWDDTASD
VRQRCFKKDSSLCSQPTCETTPPNYRIECQALLDNPWMLTNENECLDAGCCWDPFVSQNL
PCYDKFIERASEAKCQQVPSSLRTDCGWKQITKDQCMNRGCCFDSNVDNAPWCFYSSAMD
SNTNEPVEIQKIMKKMNQLFRKLQQQKNRGRLLNLRFQQLKHQNQKQQQQPPKTTTPKTT
TPNTTSRKTTTPKTATPKATTTKATTPKATTPMATTTKPKATTTTKATAPMATTTTKPKT
TTSKTTTLNNKQTTTTPMATTPTTATTARTTTTTKTTTIPTTPTTTTPKTTTTSMTITTI
ETSKATTTTTPAATTTTPMATTTTATTARTTTTTKTTTIPMAPTTTTPKTTTTSMTITTI
ETSKATTTTTPAATTTTPMATTTTVTTTTPKTTTTPMSTTTTPRTARTTTTTTSTYYTTN
PPVQTSTYKWRSTQGTINNISPRTTVAVLFPETRPSTPTSNARTPPNLNNVIENTSQFVN
PIPTKDPFISNPSPKPMQNNPAVEAWDQNRVLCLLGNAKLCSLVLFNQARPQVPYIVQSN
SVAYLNQNGSMIKTPVASTNYYSNDLKSQSLPKTPKPVASNRTLVVKPISPYTRIKSMCQ
TMKLLNMVKGDMVKICSFAQMYGPNGLTLPSSEVIQQVLSGETNLLTSALSTGTNEIPQF
ERNLLGLIGGGKPTVTKECRNAEGLHSKSKFSLPCLSSVVANSESECVAVGCCWVHGSVL
SRLLNLDTSANPLLTLMLNPSNPLASNARCISPIDDPTLNLMFSVASVTEAQNLMSAAEN
TQIKSTQQRTQHTDGEHSALESSNLSESCTSVITRVDCGEHEWFKCVQRGCCWVQTPGQH
SCFLPVN
Nucleotide sequence
Length: 3,148
>KH2012:KH.C1.1109.v1.A.SL1-1
CTTACTGCTGGCCTATATATACACACCATAGGATTTTTATATAACTACAGTGTTTTTTTT
TTGAGATGACAAGAATTCAAATTCCTCTCGTCGTTTTGTTTGTTCTTTTACTGCAGCAAG
AATGTTTCTCAAAATTTGTTTGGAAAATGTCTTCTGATCTGAGTAAGGAATGGACGCATG
GAAGATTGAAGGCATTTGAGAGTGGCGAGTTTGAGGAAGAAATAGAAGAAAGCGAAGTGA
GAGAGGTGGAAGAAGAAGGCGAGGAGGAGAAGGAAATGTTTAACGTTCCATGTGCGGCAG
AATGCTCCACCGCTTACGGAAGGAGGGTCTCCTGTGAATACACTGGTAAAAGCGAGAAGA
AATGTTTATCTCGTAATTGCTGTTGGGATGATACTGCTTCTGATGTGAGGCAAAGATGTT
TTAAAAAAGATTCGTCATTATGCTCACAACCCACATGTGAAACCACACCACCAAACTACA
GGATAGAATGCCAGGCATTGCTGGACAATCCTTGGATGCTTACTAATGAAAATGAATGTT
TGGATGCTGGTTGCTGTTGGGACCCATTCGTATCACAGAACCTCCCATGTTATGATAAAT
TCATTGAGAGAGCATCAGAAGCAAAATGCCAACAGGTTCCTTCCTCCTTAAGAACAGACT
GTGGGTGGAAACAGATCACTAAAGATCAATGTATGAATAGAGGATGTTGTTTTGACAGCA
ATGTTGATAATGCTCCATGGTGTTTCTATTCCAGTGCGATGGATTCGAATACCAATGAAC
CTGTGGAAATCCAGAAAATAATGAAGAAAATGAATCAACTGTTTCGAAAACTACAACAAC
AGAAAAATCGTGGTCGTTTATTGAATTTACGATTCCAACAACTAAAACACCAAAACCAAA
AACAACAACAACAACCGCCAAAAACAACAACCCCCAAAACAACAACCCCAAACACAACAA
GCCGAAAAACAACAACCCCAAAAACAGCAACACCAAAAGCAACGACAACAAAAGCAACAA
CACCAAAAGCAACAACACCAATGGCTACAACAACAAAACCAAAAGCAACAACAACAACAA
AAGCAACAGCACCAATGGCAACAACAACAACAAAACCAAAAACAACAACATCAAAAACAA
CAACCCTAAACAACAAGCAAACAACAACAACACCAATGGCAACAACACCAACAACAGCAA
CAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAACAACACCAACAACAA
CAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGCAA
CCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGCAA
CAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAATGGCACCAACAACAA
CAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGCAA
CCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGTAA
CAACAACAACACCAAAAACAACAACAACACCAATGTCAACTACAACAACACCAAGGACAG
CAAGAACAACAACAACAACAACATCAACTTACTATACCACCAACCCACCCGTTCAAACAT
CAACATACAAATGGCGATCCACCCAAGGAACAATAAACAACATATCCCCTCGTACCACAG
TAGCCGTGTTGTTTCCTGAAACACGACCAAGCACCCCAACATCCAATGCTCGTACACCTC
CTAATTTAAACAACGTAATTGAAAACACTTCACAGTTTGTGAACCCAATTCCTACAAAGG
ATCCTTTCATATCTAACCCATCACCTAAACCAATGCAAAACAACCCAGCTGTAGAGGCAT
GGGATCAAAACCGTGTTCTATGTTTGTTGGGAAACGCTAAACTTTGCTCTCTTGTTTTAT
TCAACCAAGCAAGACCACAAGTTCCTTACATTGTTCAATCAAATTCAGTCGCTTATTTGA
ATCAAAATGGCTCCATGATCAAGACACCAGTCGCAAGTACTAACTACTACAGCAATGATT
TAAAAAGCCAGTCTCTGCCTAAAACACCAAAACCCGTAGCAAGCAACAGAACTTTGGTTG
TTAAACCCATTAGTCCATACACCAGGATTAAGTCAATGTGCCAAACTATGAAGTTGCTGA
ATATGGTCAAAGGGGACATGGTTAAAATATGTTCCTTTGCTCAAATGTATGGACCAAATG
GTTTAACTCTACCAAGTTCTGAAGTCATTCAACAAGTACTTTCTGGAGAAACAAACTTAC
TAACTTCAGCACTTTCAACTGGAACAAATGAAATTCCACAATTTGAGAGAAACTTGTTGG
GACTTATTGGTGGTGGAAAGCCAACTGTAACTAAAGAATGTCGAAATGCTGAAGGCTTAC
ATAGCAAAAGTAAATTTAGTTTACCTTGCTTGTCATCTGTTGTGGCCAACAGTGAAAGTG
AATGTGTAGCTGTTGGGTGTTGCTGGGTCCATGGGAGTGTTCTATCTCGTCTCCTGAACC
TGGATACCTCAGCCAACCCACTTCTTACACTCATGTTGAATCCAAGCAACCCACTTGCTT
CAAATGCTAGATGTATTTCTCCTATTGATGACCCAACGCTAAACTTAATGTTTTCAGTGG
CATCGGTAACAGAAGCACAGAACCTTATGTCAGCAGCAGAAAACACACAAATTAAATCAA
CACAGCAAAGAACGCAACATACAGATGGTGAACATTCAGCATTGGAATCCAGCAACTTAT
CCGAGAGCTGTACAAGTGTCATTACAAGGGTGGATTGTGGTGAACATGAATGGTTTAAAT
GCGTACAACGAGGGTGTTGTTGGGTACAAACACCTGGGCAACATTCATGTTTCTTACCAG
TCAATTGAAATCAAACTGGGAAAAACAACCATGAAAATATATTAGCTATTTGAGGAGCAT
CTGCTTTCCAGTTCAATTGGTCAAGATTTCTCATCCTTATTTTATTCATTTCATTCCTTA
TTTGCATTGGTGCCATTTTTACTTTATTGTACACATTGTGATTTTTATTTTACCGCTGTG
GTGTAAATACATGGACGTTAGACGCTCA
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[85-129] 11.647 - T[136-186] 10.27 - T[193-237] 17.337 - T[927-966] 8.725 |
| CDD |
P_trefoil_dom (IPR000519) - T[85-129] 8.7195E-5 - T[193-235] 3.2199E-12 |
| SMART |
P_trefoil_dom (IPR000519) - T[85-132] 0.011 - T[193-240] 1.9E-14 |
| Pfam |
P_trefoil_dom (IPR000519) - T[87-127] 1.7E-5 - T[138-183] 2.0E-4 - T[195-235] 2.8E-13 |
| ProSitePatterns |
P_trefoil_CS (IPR017957) - T[94-114] . |
| PRINTS |
P_trefoil_chordata (IPR017994) - T[200-212] 9.5E-8 - T[212-224] 9.5E-8 - T[224-236] 9.5E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|