Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA189YM04' > 
  2. Transcript 'Harore.CG.MTP2014.S6...' > 
  3. Transcript 'KH2012:KH.C1.1109.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1109.v1.A.SL2-1

Possible name(s)

MGAM2; MUC6

Gene model

KH2012:KH.C1.1109

Location

KhC1 [1,651,461 / 1,660,275]

Sequences

Amino acid sequence

Length: 967

>KH.C1.1109.v1.A.SL2-1
LQCFFFEMTRIQIPLVVLFVLLLQQECFSKFVWKMSSDLSKEWTHGRLKAFESGEFEEEI
EESEVREVEEEGEEEKEMFNVPCAAECSTAYGRRVSCEYTGKSEKKCLSRNCCWDDTASD
VRQRCFKKDSSLCSQPTCETTPPNYRIECQALLDNPWMLTNENECLDAGCCWDPFVSQNL
PCYDKFIERASEAKCQQVPSSLRTDCGWKQITKDQCMNRGCCFDSNVDNAPWCFYSSAMD
SNTNEPVEIQKIMKKMNQLFRKLQQQKNRGRLLNLRFQQLKHQNQKQQQQPPKTTTPKTT
TPNTTSRKTTTPKTATPKATTTKATTPKATTPMATTTKPKATTTTKATAPMATTTTKPKT
TTSKTTTLNNKQTTTTPMATTPTTATTARTTTTTKTTTIPTTPTTTTPKTTTTSMTITTI
ETSKATTTTTPAATTTTPMATTTTATTARTTTTTKTTTIPMAPTTTTPKTTTTSMTITTI
ETSKATTTTTPAATTTTPMATTTTVTTTTPKTTTTPMSTTTTPRTARTTTTTTSTYYTTN
PPVQTSTYKWRSTQGTINNISPRTTVAVLFPETRPSTPTSNARTPPNLNNVIENTSQFVN
PIPTKDPFISNPSPKPMQNNPAVEAWDQNRVLCLLGNAKLCSLVLFNQARPQVPYIVQSN
SVAYLNQNGSMIKTPVASTNYYSNDLKSQSLPKTPKPVASNRTLVVKPISPYTRIKSMCQ
TMKLLNMVKGDMVKICSFAQMYGPNGLTLPSSEVIQQVLSGETNLLTSALSTGTNEIPQF
ERNLLGLIGGGKPTVTKECRNAEGLHSKSKFSLPCLSSVVANSESECVAVGCCWVHGSVL
SRLLNLDTSANPLLTLMLNPSNPLASNARCISPIDDPTLNLMFSVASVTEAQNLMSAAEN
TQIKSTQQRTQHTDGEHSALESSNLSESCTSVITRVDCGEHEWFKCVQRGCCWVQTPGQH
SCFLPVN

Nucleotide sequence

Length: 3,157

>KH2012:KH.C1.1109.v1.A.SL2-1
TTTTCGCAGCTTACTGCTGGCCTATATATACACACCATAGGATTTTTATATAACTACAGT
GTTTTTTTTTTGAGATGACAAGAATTCAAATTCCTCTCGTCGTTTTGTTTGTTCTTTTAC
TGCAGCAAGAATGTTTCTCAAAATTTGTTTGGAAAATGTCTTCTGATCTGAGTAAGGAAT
GGACGCATGGAAGATTGAAGGCATTTGAGAGTGGCGAGTTTGAGGAAGAAATAGAAGAAA
GCGAAGTGAGAGAGGTGGAAGAAGAAGGCGAGGAGGAGAAGGAAATGTTTAACGTTCCAT
GTGCGGCAGAATGCTCCACCGCTTACGGAAGGAGGGTCTCCTGTGAATACACTGGTAAAA
GCGAGAAGAAATGTTTATCTCGTAATTGCTGTTGGGATGATACTGCTTCTGATGTGAGGC
AAAGATGTTTTAAAAAAGATTCGTCATTATGCTCACAACCCACATGTGAAACCACACCAC
CAAACTACAGGATAGAATGCCAGGCATTGCTGGACAATCCTTGGATGCTTACTAATGAAA
ATGAATGTTTGGATGCTGGTTGCTGTTGGGACCCATTCGTATCACAGAACCTCCCATGTT
ATGATAAATTCATTGAGAGAGCATCAGAAGCAAAATGCCAACAGGTTCCTTCCTCCTTAA
GAACAGACTGTGGGTGGAAACAGATCACTAAAGATCAATGTATGAATAGAGGATGTTGTT
TTGACAGCAATGTTGATAATGCTCCATGGTGTTTCTATTCCAGTGCGATGGATTCGAATA
CCAATGAACCTGTGGAAATCCAGAAAATAATGAAGAAAATGAATCAACTGTTTCGAAAAC
TACAACAACAGAAAAATCGTGGTCGTTTATTGAATTTACGATTCCAACAACTAAAACACC
AAAACCAAAAACAACAACAACAACCGCCAAAAACAACAACCCCCAAAACAACAACCCCAA
ACACAACAAGCCGAAAAACAACAACCCCAAAAACAGCAACACCAAAAGCAACGACAACAA
AAGCAACAACACCAAAAGCAACAACACCAATGGCTACAACAACAAAACCAAAAGCAACAA
CAACAACAAAAGCAACAGCACCAATGGCAACAACAACAACAAAACCAAAAACAACAACAT
CAAAAACAACAACCCTAAACAACAAGCAAACAACAACAACACCAATGGCAACAACACCAA
CAACAGCAACAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAACAACAC
CAACAACAACAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACAT
CAAAAGCAACCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAA
CAACAGCAACAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAATGGCAC
CAACAACAACAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACAT
CAAAAGCAACCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAA
CAACAGTAACAACAACAACACCAAAAACAACAACAACACCAATGTCAACTACAACAACAC
CAAGGACAGCAAGAACAACAACAACAACAACATCAACTTACTATACCACCAACCCACCCG
TTCAAACATCAACATACAAATGGCGATCCACCCAAGGAACAATAAACAACATATCCCCTC
GTACCACAGTAGCCGTGTTGTTTCCTGAAACACGACCAAGCACCCCAACATCCAATGCTC
GTACACCTCCTAATTTAAACAACGTAATTGAAAACACTTCACAGTTTGTGAACCCAATTC
CTACAAAGGATCCTTTCATATCTAACCCATCACCTAAACCAATGCAAAACAACCCAGCTG
TAGAGGCATGGGATCAAAACCGTGTTCTATGTTTGTTGGGAAACGCTAAACTTTGCTCTC
TTGTTTTATTCAACCAAGCAAGACCACAAGTTCCTTACATTGTTCAATCAAATTCAGTCG
CTTATTTGAATCAAAATGGCTCCATGATCAAGACACCAGTCGCAAGTACTAACTACTACA
GCAATGATTTAAAAAGCCAGTCTCTGCCTAAAACACCAAAACCCGTAGCAAGCAACAGAA
CTTTGGTTGTTAAACCCATTAGTCCATACACCAGGATTAAGTCAATGTGCCAAACTATGA
AGTTGCTGAATATGGTCAAAGGGGACATGGTTAAAATATGTTCCTTTGCTCAAATGTATG
GACCAAATGGTTTAACTCTACCAAGTTCTGAAGTCATTCAACAAGTACTTTCTGGAGAAA
CAAACTTACTAACTTCAGCACTTTCAACTGGAACAAATGAAATTCCACAATTTGAGAGAA
ACTTGTTGGGACTTATTGGTGGTGGAAAGCCAACTGTAACTAAAGAATGTCGAAATGCTG
AAGGCTTACATAGCAAAAGTAAATTTAGTTTACCTTGCTTGTCATCTGTTGTGGCCAACA
GTGAAAGTGAATGTGTAGCTGTTGGGTGTTGCTGGGTCCATGGGAGTGTTCTATCTCGTC
TCCTGAACCTGGATACCTCAGCCAACCCACTTCTTACACTCATGTTGAATCCAAGCAACC
CACTTGCTTCAAATGCTAGATGTATTTCTCCTATTGATGACCCAACGCTAAACTTAATGT
TTTCAGTGGCATCGGTAACAGAAGCACAGAACCTTATGTCAGCAGCAGAAAACACACAAA
TTAAATCAACACAGCAAAGAACGCAACATACAGATGGTGAACATTCAGCATTGGAATCCA
GCAACTTATCCGAGAGCTGTACAAGTGTCATTACAAGGGTGGATTGTGGTGAACATGAAT
GGTTTAAATGCGTACAACGAGGGTGTTGTTGGGTACAAACACCTGGGCAACATTCATGTT
TCTTACCAGTCAATTGAAATCAAACTGGGAAAAACAACCATGAAAATATATTAGCTATTT
GAGGAGCATCTGCTTTCCAGTTCAATTGGTCAAGATTTCTCATCCTTATTTTATTCATTT
CATTCCTTATTTGCATTGGTGCCATTTTTACTTTATTGTACACATTGTGATTTTTATTTT
ACCGCTGTGGTGTAAATACATGGACGTTAGACGCTCA

InterProScan

ProSiteProfiles
P_trefoil_dom (IPR000519) - T[85-129] 11.647 - T[136-186] 10.27 - T[193-237] 17.337 - T[927-966] 8.725
CDD
P_trefoil_dom (IPR000519) - T[85-129] 8.7195E-5 - T[193-235] 3.2199E-12
SMART
P_trefoil_dom (IPR000519) - T[85-132] 0.011 - T[193-240] 1.9E-14
Pfam
P_trefoil_dom (IPR000519) - T[87-127] 1.7E-5 - T[138-183] 2.0E-4 - T[195-235] 2.8E-13
ProSitePatterns
P_trefoil_CS (IPR017957) - T[94-114] .
PRINTS
P_trefoil_chordata (IPR017994) - T[200-212] 9.5E-8 - T[212-224] 9.5E-8 - T[224-236] 9.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value