- Transcript 'KH2012:KH.C1.1109.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1109.v2.A.nonSL4-1
Possible name(s)
MGAM2; MUC6
Gene model
Location
KhC1 [1,651,461 / 1,659,699]
Amino acid sequence
Length: 892
>KH.C1.1109.v2.A.nonSL4-1
KEMFNVPCAAECSTAYGRRVSCEYTGKSEKKCLSRNCCWDDTASDVRQRCFKKDSSLCSQ
PTCETTPPNYRIECQALLDNPWMLTNENECLDAGCCWDPFVSQNLPCYDKFIERASEAKC
QQVPSSLRTDCGWKQITKDQCMNRGCCFDSNVDNAPWCFYSSAMDSNTNEPVEIQKIMKK
MNQLFRKLQQQKNRGRLLNLRFQQLKHQNQKQQQQPPKTTTPKTTTPNTTSRKTTTPKTA
TPKATTTKATTPKATTPMATTTKPKATTTTKATAPMATTTTKPKTTTSKTTTLNNKQTTT
TPMATTPTTATTARTTTTTKTTTIPTTPTTTTPKTTTTSMTITTIETSKATTTTTPAATT
TTPMATTTTATTARTTTTTKTTTIPMAPTTTTPKTTTTSMTITTIETSKATTTTTPAATT
TTPMATTTTVTTTTPKTTTTPMSTTTTPRTARTTTTTTSTYYTTNPPVQTSTYKWRSTQG
TINNISPRTTVAVLFPETRPSTPTSNARTPPNLNNVIENTSQFVNPIPTKDPFISNPSPK
PMQNNPAVEAWDQNRVLCLLGNAKLCSLVLFNQARPQVPYIVQSNSVAYLNQNGSMIKTP
VASTNYYSNDLKSQSLPKTPKPVASNRTLVVKPISPYTRIKSMCQTMKLLNMVKGDMVKI
CSFAQMYGPNGLTLPSSEVIQQVLSGETNLLTSALSTGTNEIPQFERNLLGLIGGGKPTV
TKECRNAEGLHSKSKFSLPCLSSVVANSESECVAVGCCWVHGSVLSRLLNLDTSANPLLT
LMLNPSNPLASNARCISPIDDPTLNLMFSVASVTEAQNLMSAAENTQIKSTQQRTQHTDG
EHSALESSNLSESCTSVITRVDCGEHEWFKCVQRGCCWVQTPGQHSCFLPVN
Nucleotide sequence
Length: 2,879
>KH2012:KH.C1.1109.v2.A.nonSL4-1
AAGGAAATGTTTAACGTTCCATGTGCGGCAGAATGCTCCACCGCTTACGGAAGGAGGGTC
TCCTGTGAATACACTGGTAAAAGCGAGAAGAAATGTTTATCTCGTAATTGCTGTTGGGAT
GATACTGCTTCTGATGTGAGGCAAAGATGTTTTAAAAAAGATTCGTCATTATGCTCACAA
CCCACATGTGAAACCACACCACCAAACTACAGGATAGAATGCCAGGCATTGCTGGACAAT
CCTTGGATGCTTACTAATGAAAATGAATGTTTGGATGCTGGTTGCTGTTGGGACCCATTC
GTATCACAGAACCTCCCATGTTATGATAAATTCATTGAGAGAGCATCAGAAGCAAAATGC
CAACAGGTTCCTTCCTCCTTAAGAACAGACTGTGGGTGGAAACAGATCACTAAAGATCAA
TGTATGAATAGAGGATGTTGTTTTGACAGCAATGTTGATAATGCTCCATGGTGTTTCTAT
TCCAGTGCGATGGATTCGAATACCAATGAACCTGTGGAAATCCAGAAAATAATGAAGAAA
ATGAATCAACTGTTTCGAAAACTACAACAACAGAAAAATCGTGGTCGTTTATTGAATTTA
CGATTCCAACAACTAAAACACCAAAACCAAAAACAACAACAACAACCGCCAAAAACAACA
ACCCCCAAAACAACAACCCCAAACACAACAAGCCGAAAAACAACAACCCCAAAAACAGCA
ACACCAAAAGCAACGACAACAAAAGCAACAACACCAAAAGCAACAACACCAATGGCTACA
ACAACAAAACCAAAAGCAACAACAACAACAAAAGCAACAGCACCAATGGCAACAACAACA
ACAAAACCAAAAACAACAACATCAAAAACAACAACCCTAAACAACAAGCAAACAACAACA
ACACCAATGGCAACAACACCAACAACAGCAACAACAGCAAGAACAACAACAACAACAAAA
ACAACAACAATCCCAACAACACCAACAACAACAACACCAAAAACAACAACAACTTCAATG
ACAATAACAACCATAGAAACATCAAAAGCAACCACAACAACAACACCAGCAGCAACAACA
ACAACACCAATGGCAACTACAACAACAGCAACAACAGCAAGAACAACAACAACAACAAAA
ACAACAACAATCCCAATGGCACCAACAACAACAACACCAAAAACAACAACAACTTCAATG
ACAATAACAACCATAGAAACATCAAAAGCAACCACAACAACAACACCAGCAGCAACAACA
ACAACACCAATGGCAACTACAACAACAGTAACAACAACAACACCAAAAACAACAACAACA
CCAATGTCAACTACAACAACACCAAGGACAGCAAGAACAACAACAACAACAACATCAACT
TACTATACCACCAACCCACCCGTTCAAACATCAACATACAAATGGCGATCCACCCAAGGA
ACAATAAACAACATATCCCCTCGTACCACAGTAGCCGTGTTGTTTCCTGAAACACGACCA
AGCACCCCAACATCCAATGCTCGTACACCTCCTAATTTAAACAACGTAATTGAAAACACT
TCACAGTTTGTGAACCCAATTCCTACAAAGGATCCTTTCATATCTAACCCATCACCTAAA
CCAATGCAAAACAACCCAGCTGTAGAGGCATGGGATCAAAACCGTGTTCTATGTTTGTTG
GGAAACGCTAAACTTTGCTCTCTTGTTTTATTCAACCAAGCAAGACCACAAGTTCCTTAC
ATTGTTCAATCAAATTCAGTCGCTTATTTGAATCAAAATGGCTCCATGATCAAGACACCA
GTCGCAAGTACTAACTACTACAGCAATGATTTAAAAAGCCAGTCTCTGCCTAAAACACCA
AAACCCGTAGCAAGCAACAGAACTTTGGTTGTTAAACCCATTAGTCCATACACCAGGATT
AAGTCAATGTGCCAAACTATGAAGTTGCTGAATATGGTCAAAGGGGACATGGTTAAAATA
TGTTCCTTTGCTCAAATGTATGGACCAAATGGTTTAACTCTACCAAGTTCTGAAGTCATT
CAACAAGTACTTTCTGGAGAAACAAACTTACTAACTTCAGCACTTTCAACTGGAACAAAT
GAAATTCCACAATTTGAGAGAAACTTGTTGGGACTTATTGGTGGTGGAAAGCCAACTGTA
ACTAAAGAATGTCGAAATGCTGAAGGCTTACATAGCAAAAGTAAATTTAGTTTACCTTGC
TTGTCATCTGTTGTGGCCAACAGTGAAAGTGAATGTGTAGCTGTTGGGTGTTGCTGGGTC
CATGGGAGTGTTCTATCTCGTCTCCTGAACCTGGATACCTCAGCCAACCCACTTCTTACA
CTCATGTTGAATCCAAGCAACCCACTTGCTTCAAATGCTAGATGTATTTCTCCTATTGAT
GACCCAACGCTAAACTTAATGTTTTCAGTGGCATCGGTAACAGAAGCACAGAACCTTATG
TCAGCAGCAGAAAACACACAAATTAAATCAACACAGCAAAGAACGCAACATACAGATGGT
GAACATTCAGCATTGGAATCCAGCAACTTATCCGAGAGCTGTACAAGTGTCATTACAAGG
GTGGATTGTGGTGAACATGAATGGTTTAAATGCGTACAACGAGGGTGTTGTTGGGTACAA
ACACCTGGGCAACATTCATGTTTCTTACCAGTCAATTGAAATCAAACTGGGAAAAACAAC
CATGAAAATATATTAGCTATTTGAGGAGCATCTGCTTTCCAGTTCAATTGGTCAAGATTT
CTCATCCTTATTTTATTCATTTCATTCCTTATTTGCATTGGTGCCATTTTTACTTTATTG
TACACATTGTGATTTTTATTTTACCGCTGTGGTGTAAATACATGGACGTTAGACGCTCA
| CDD |
P_trefoil_dom (IPR000519) - T[10-54] 8.87323E-5 - T[118-160] 3.37315E-12 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[10-54] 11.647 - T[61-111] 10.27 - T[118-162] 17.337 - T[852-891] 8.725 |
| SMART |
P_trefoil_dom (IPR000519) - T[10-57] 0.011 - T[118-165] 1.9E-14 |
| Pfam |
P_trefoil_dom (IPR000519) - T[12-52] 1.6E-5 - T[63-108] 1.8E-4 - T[120-160] 2.5E-13 |
| ProSitePatterns |
P_trefoil_CS (IPR017957) - T[19-39] . |
| PRINTS |
P_trefoil_chordata (IPR017994) - T[125-137] 7.6E-8 - T[137-149] 7.6E-8 - T[149-161] 7.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|