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TRANSCRIPT CARD

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  1. Clone 'cieg050a09' > 
  2. Clone 'AHC2BAA16YD16' > 
  3. Clone 'ma303p14' > 
  4. Transcript 'Haaura.CG.MTP2014.S4...' > 
  5. Transcript 'KH2012:KH.C1.1109.v2...'

Transcript Model

Transcript Id

KH2012:KH.C1.1109.v2.A.nonSL6-1

Possible name(s)

MGAM2; MUC6

Gene model

KH2012:KH.C1.1109

Location

KhC1 [1,651,461 / 1,659,730]

Sequences

Amino acid sequence

Length: 902

>KH.C1.1109.v2.A.nonSL6-1
REVEEEGEEEKEMFNVPCAAECSTAYGRRVSCEYTGKSEKKCLSRNCCWDDTASDVRQRC
FKKDSSLCSQPTCETTPPNYRIECQALLDNPWMLTNENECLDAGCCWDPFVSQNLPCYDK
FIERASEAKCQQVPSSLRTDCGWKQITKDQCMNRGCCFDSNVDNAPWCFYSSAMDSNTNE
PVEIQKIMKKMNQLFRKLQQQKNRGRLLNLRFQQLKHQNQKQQQQPPKTTTPKTTTPNTT
SRKTTTPKTATPKATTTKATTPKATTPMATTTKPKATTTTKATAPMATTTTKPKTTTSKT
TTLNNKQTTTTPMATTPTTATTARTTTTTKTTTIPTTPTTTTPKTTTTSMTITTIETSKA
TTTTTPAATTTTPMATTTTATTARTTTTTKTTTIPMAPTTTTPKTTTTSMTITTIETSKA
TTTTTPAATTTTPMATTTTVTTTTPKTTTTPMSTTTTPRTARTTTTTTSTYYTTNPPVQT
STYKWRSTQGTINNISPRTTVAVLFPETRPSTPTSNARTPPNLNNVIENTSQFVNPIPTK
DPFISNPSPKPMQNNPAVEAWDQNRVLCLLGNAKLCSLVLFNQARPQVPYIVQSNSVAYL
NQNGSMIKTPVASTNYYSNDLKSQSLPKTPKPVASNRTLVVKPISPYTRIKSMCQTMKLL
NMVKGDMVKICSFAQMYGPNGLTLPSSEVIQQVLSGETNLLTSALSTGTNEIPQFERNLL
GLIGGGKPTVTKECRNAEGLHSKSKFSLPCLSSVVANSESECVAVGCCWVHGSVLSRLLN
LDTSANPLLTLMLNPSNPLASNARCISPIDDPTLNLMFSVASVTEAQNLMSAAENTQIKS
TQQRTQHTDGEHSALESSNLSESCTSVITRVDCGEHEWFKCVQRGCCWVQTPGQHSCFLP
VN

Nucleotide sequence

Length: 2,910

>KH2012:KH.C1.1109.v2.A.nonSL6-1
GAGAGAGGTGGAAGAAGAAGGCGAGGAGGAGAAGGAAATGTTTAACGTTCCATGTGCGGC
AGAATGCTCCACCGCTTACGGAAGGAGGGTCTCCTGTGAATACACTGGTAAAAGCGAGAA
GAAATGTTTATCTCGTAATTGCTGTTGGGATGATACTGCTTCTGATGTGAGGCAAAGATG
TTTTAAAAAAGATTCGTCATTATGCTCACAACCCACATGTGAAACCACACCACCAAACTA
CAGGATAGAATGCCAGGCATTGCTGGACAATCCTTGGATGCTTACTAATGAAAATGAATG
TTTGGATGCTGGTTGCTGTTGGGACCCATTCGTATCACAGAACCTCCCATGTTATGATAA
ATTCATTGAGAGAGCATCAGAAGCAAAATGCCAACAGGTTCCTTCCTCCTTAAGAACAGA
CTGTGGGTGGAAACAGATCACTAAAGATCAATGTATGAATAGAGGATGTTGTTTTGACAG
CAATGTTGATAATGCTCCATGGTGTTTCTATTCCAGTGCGATGGATTCGAATACCAATGA
ACCTGTGGAAATCCAGAAAATAATGAAGAAAATGAATCAACTGTTTCGAAAACTACAACA
ACAGAAAAATCGTGGTCGTTTATTGAATTTACGATTCCAACAACTAAAACACCAAAACCA
AAAACAACAACAACAACCGCCAAAAACAACAACCCCCAAAACAACAACCCCAAACACAAC
AAGCCGAAAAACAACAACCCCAAAAACAGCAACACCAAAAGCAACGACAACAAAAGCAAC
AACACCAAAAGCAACAACACCAATGGCTACAACAACAAAACCAAAAGCAACAACAACAAC
AAAAGCAACAGCACCAATGGCAACAACAACAACAAAACCAAAAACAACAACATCAAAAAC
AACAACCCTAAACAACAAGCAAACAACAACAACACCAATGGCAACAACACCAACAACAGC
AACAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAACAACACCAACAAC
AACAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGC
AACCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGC
AACAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAATGGCACCAACAAC
AACAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGC
AACCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGT
AACAACAACAACACCAAAAACAACAACAACACCAATGTCAACTACAACAACACCAAGGAC
AGCAAGAACAACAACAACAACAACATCAACTTACTATACCACCAACCCACCCGTTCAAAC
ATCAACATACAAATGGCGATCCACCCAAGGAACAATAAACAACATATCCCCTCGTACCAC
AGTAGCCGTGTTGTTTCCTGAAACACGACCAAGCACCCCAACATCCAATGCTCGTACACC
TCCTAATTTAAACAACGTAATTGAAAACACTTCACAGTTTGTGAACCCAATTCCTACAAA
GGATCCTTTCATATCTAACCCATCACCTAAACCAATGCAAAACAACCCAGCTGTAGAGGC
ATGGGATCAAAACCGTGTTCTATGTTTGTTGGGAAACGCTAAACTTTGCTCTCTTGTTTT
ATTCAACCAAGCAAGACCACAAGTTCCTTACATTGTTCAATCAAATTCAGTCGCTTATTT
GAATCAAAATGGCTCCATGATCAAGACACCAGTCGCAAGTACTAACTACTACAGCAATGA
TTTAAAAAGCCAGTCTCTGCCTAAAACACCAAAACCCGTAGCAAGCAACAGAACTTTGGT
TGTTAAACCCATTAGTCCATACACCAGGATTAAGTCAATGTGCCAAACTATGAAGTTGCT
GAATATGGTCAAAGGGGACATGGTTAAAATATGTTCCTTTGCTCAAATGTATGGACCAAA
TGGTTTAACTCTACCAAGTTCTGAAGTCATTCAACAAGTACTTTCTGGAGAAACAAACTT
ACTAACTTCAGCACTTTCAACTGGAACAAATGAAATTCCACAATTTGAGAGAAACTTGTT
GGGACTTATTGGTGGTGGAAAGCCAACTGTAACTAAAGAATGTCGAAATGCTGAAGGCTT
ACATAGCAAAAGTAAATTTAGTTTACCTTGCTTGTCATCTGTTGTGGCCAACAGTGAAAG
TGAATGTGTAGCTGTTGGGTGTTGCTGGGTCCATGGGAGTGTTCTATCTCGTCTCCTGAA
CCTGGATACCTCAGCCAACCCACTTCTTACACTCATGTTGAATCCAAGCAACCCACTTGC
TTCAAATGCTAGATGTATTTCTCCTATTGATGACCCAACGCTAAACTTAATGTTTTCAGT
GGCATCGGTAACAGAAGCACAGAACCTTATGTCAGCAGCAGAAAACACACAAATTAAATC
AACACAGCAAAGAACGCAACATACAGATGGTGAACATTCAGCATTGGAATCCAGCAACTT
ATCCGAGAGCTGTACAAGTGTCATTACAAGGGTGGATTGTGGTGAACATGAATGGTTTAA
ATGCGTACAACGAGGGTGTTGTTGGGTACAAACACCTGGGCAACATTCATGTTTCTTACC
AGTCAATTGAAATCAAACTGGGAAAAACAACCATGAAAATATATTAGCTATTTGAGGAGC
ATCTGCTTTCCAGTTCAATTGGTCAAGATTTCTCATCCTTATTTTATTCATTTCATTCCT
TATTTGCATTGGTGCCATTTTTACTTTATTGTACACATTGTGATTTTTATTTTACCGCTG
TGGTGTAAATACATGGACGTTAGACGCTCA

InterProScan

CDD
P_trefoil_dom (IPR000519) - T[20-64] 8.97299E-5 - T[128-170] 3.41088E-12
SMART
P_trefoil_dom (IPR000519) - T[20-67] 0.011 - T[128-175] 1.9E-14
ProSiteProfiles
P_trefoil_dom (IPR000519) - T[20-64] 11.647 - T[71-121] 10.27 - T[128-172] 17.337 - T[862-901] 8.725
Pfam
P_trefoil_dom (IPR000519) - T[22-62] 1.6E-5 - T[73-118] 1.8E-4 - T[130-170] 2.5E-13
ProSitePatterns
P_trefoil_CS (IPR017957) - T[29-49] .
PRINTS
P_trefoil_chordata (IPR017994) - T[135-147] 7.8E-8 - T[147-159] 7.8E-8 - T[159-171] 7.8E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value