- Transcript 'KH2012:KH.C1.1109.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1109.v2.A.SL3-1
Possible name(s)
MGAM2; MUC6
Gene model
Location
KhC1 [1,651,461 / 1,659,848]
Amino acid sequence
Length: 941
>KH.C1.1109.v2.A.SL3-1
CFSKFVWKMSSDLSKEWTHGRLKAFESGEFEEEIEESEVREVEEEGEEEKEMFNVPCAAE
CSTAYGRRVSCEYTGKSEKKCLSRNCCWDDTASDVRQRCFKKDSSLCSQPTCETTPPNYR
IECQALLDNPWMLTNENECLDAGCCWDPFVSQNLPCYDKFIERASEAKCQQVPSSLRTDC
GWKQITKDQCMNRGCCFDSNVDNAPWCFYSSAMDSNTNEPVEIQKIMKKMNQLFRKLQQQ
KNRGRLLNLRFQQLKHQNQKQQQQPPKTTTPKTTTPNTTSRKTTTPKTATPKATTTKATT
PKATTPMATTTKPKATTTTKATAPMATTTTKPKTTTSKTTTLNNKQTTTTPMATTPTTAT
TARTTTTTKTTTIPTTPTTTTPKTTTTSMTITTIETSKATTTTTPAATTTTPMATTTTAT
TARTTTTTKTTTIPMAPTTTTPKTTTTSMTITTIETSKATTTTTPAATTTTPMATTTTVT
TTTPKTTTTPMSTTTTPRTARTTTTTTSTYYTTNPPVQTSTYKWRSTQGTINNISPRTTV
AVLFPETRPSTPTSNARTPPNLNNVIENTSQFVNPIPTKDPFISNPSPKPMQNNPAVEAW
DQNRVLCLLGNAKLCSLVLFNQARPQVPYIVQSNSVAYLNQNGSMIKTPVASTNYYSNDL
KSQSLPKTPKPVASNRTLVVKPISPYTRIKSMCQTMKLLNMVKGDMVKICSFAQMYGPNG
LTLPSSEVIQQVLSGETNLLTSALSTGTNEIPQFERNLLGLIGGGKPTVTKECRNAEGLH
SKSKFSLPCLSSVVANSESECVAVGCCWVHGSVLSRLLNLDTSANPLLTLMLNPSNPLAS
NARCISPIDDPTLNLMFSVASVTEAQNLMSAAENTQIKSTQQRTQHTDGEHSALESSNLS
ESCTSVITRVDCGEHEWFKCVQRGCCWVQTPGQHSCFLPVN
Nucleotide sequence
Length: 3,028
>KH2012:KH.C1.1109.v2.A.SL3-1
AATGTTTCTCAAAATTTGTTTGGAAAATGTCTTCTGATCTGAGTAAGGAATGGACGCATG
GAAGATTGAAGGCATTTGAGAGTGGCGAGTTTGAGGAAGAAATAGAAGAAAGCGAAGTGA
GAGAGGTGGAAGAAGAAGGCGAGGAGGAGAAGGAAATGTTTAACGTTCCATGTGCGGCAG
AATGCTCCACCGCTTACGGAAGGAGGGTCTCCTGTGAATACACTGGTAAAAGCGAGAAGA
AATGTTTATCTCGTAATTGCTGTTGGGATGATACTGCTTCTGATGTGAGGCAAAGATGTT
TTAAAAAAGATTCGTCATTATGCTCACAACCCACATGTGAAACCACACCACCAAACTACA
GGATAGAATGCCAGGCATTGCTGGACAATCCTTGGATGCTTACTAATGAAAATGAATGTT
TGGATGCTGGTTGCTGTTGGGACCCATTCGTATCACAGAACCTCCCATGTTATGATAAAT
TCATTGAGAGAGCATCAGAAGCAAAATGCCAACAGGTTCCTTCCTCCTTAAGAACAGACT
GTGGGTGGAAACAGATCACTAAAGATCAATGTATGAATAGAGGATGTTGTTTTGACAGCA
ATGTTGATAATGCTCCATGGTGTTTCTATTCCAGTGCGATGGATTCGAATACCAATGAAC
CTGTGGAAATCCAGAAAATAATGAAGAAAATGAATCAACTGTTTCGAAAACTACAACAAC
AGAAAAATCGTGGTCGTTTATTGAATTTACGATTCCAACAACTAAAACACCAAAACCAAA
AACAACAACAACAACCGCCAAAAACAACAACCCCCAAAACAACAACCCCAAACACAACAA
GCCGAAAAACAACAACCCCAAAAACAGCAACACCAAAAGCAACGACAACAAAAGCAACAA
CACCAAAAGCAACAACACCAATGGCTACAACAACAAAACCAAAAGCAACAACAACAACAA
AAGCAACAGCACCAATGGCAACAACAACAACAAAACCAAAAACAACAACATCAAAAACAA
CAACCCTAAACAACAAGCAAACAACAACAACACCAATGGCAACAACACCAACAACAGCAA
CAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAACAACACCAACAACAA
CAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGCAA
CCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGCAA
CAACAGCAAGAACAACAACAACAACAAAAACAACAACAATCCCAATGGCACCAACAACAA
CAACACCAAAAACAACAACAACTTCAATGACAATAACAACCATAGAAACATCAAAAGCAA
CCACAACAACAACACCAGCAGCAACAACAACAACACCAATGGCAACTACAACAACAGTAA
CAACAACAACACCAAAAACAACAACAACACCAATGTCAACTACAACAACACCAAGGACAG
CAAGAACAACAACAACAACAACATCAACTTACTATACCACCAACCCACCCGTTCAAACAT
CAACATACAAATGGCGATCCACCCAAGGAACAATAAACAACATATCCCCTCGTACCACAG
TAGCCGTGTTGTTTCCTGAAACACGACCAAGCACCCCAACATCCAATGCTCGTACACCTC
CTAATTTAAACAACGTAATTGAAAACACTTCACAGTTTGTGAACCCAATTCCTACAAAGG
ATCCTTTCATATCTAACCCATCACCTAAACCAATGCAAAACAACCCAGCTGTAGAGGCAT
GGGATCAAAACCGTGTTCTATGTTTGTTGGGAAACGCTAAACTTTGCTCTCTTGTTTTAT
TCAACCAAGCAAGACCACAAGTTCCTTACATTGTTCAATCAAATTCAGTCGCTTATTTGA
ATCAAAATGGCTCCATGATCAAGACACCAGTCGCAAGTACTAACTACTACAGCAATGATT
TAAAAAGCCAGTCTCTGCCTAAAACACCAAAACCCGTAGCAAGCAACAGAACTTTGGTTG
TTAAACCCATTAGTCCATACACCAGGATTAAGTCAATGTGCCAAACTATGAAGTTGCTGA
ATATGGTCAAAGGGGACATGGTTAAAATATGTTCCTTTGCTCAAATGTATGGACCAAATG
GTTTAACTCTACCAAGTTCTGAAGTCATTCAACAAGTACTTTCTGGAGAAACAAACTTAC
TAACTTCAGCACTTTCAACTGGAACAAATGAAATTCCACAATTTGAGAGAAACTTGTTGG
GACTTATTGGTGGTGGAAAGCCAACTGTAACTAAAGAATGTCGAAATGCTGAAGGCTTAC
ATAGCAAAAGTAAATTTAGTTTACCTTGCTTGTCATCTGTTGTGGCCAACAGTGAAAGTG
AATGTGTAGCTGTTGGGTGTTGCTGGGTCCATGGGAGTGTTCTATCTCGTCTCCTGAACC
TGGATACCTCAGCCAACCCACTTCTTACACTCATGTTGAATCCAAGCAACCCACTTGCTT
CAAATGCTAGATGTATTTCTCCTATTGATGACCCAACGCTAAACTTAATGTTTTCAGTGG
CATCGGTAACAGAAGCACAGAACCTTATGTCAGCAGCAGAAAACACACAAATTAAATCAA
CACAGCAAAGAACGCAACATACAGATGGTGAACATTCAGCATTGGAATCCAGCAACTTAT
CCGAGAGCTGTACAAGTGTCATTACAAGGGTGGATTGTGGTGAACATGAATGGTTTAAAT
GCGTACAACGAGGGTGTTGTTGGGTACAAACACCTGGGCAACATTCATGTTTCTTACCAG
TCAATTGAAATCAAACTGGGAAAAACAACCATGAAAATATATTAGCTATTTGAGGAGCAT
CTGCTTTCCAGTTCAATTGGTCAAGATTTCTCATCCTTATTTTATTCATTTCATTCCTTA
TTTGCATTGGTGCCATTTTTACTTTATTGTACACATTGTGATTTTTATTTTACCGCTGTG
GTGTAAATACATGGACGTTAGACGCTCA
| SMART |
P_trefoil_dom (IPR000519) - T[59-106] 0.011 - T[167-214] 1.9E-14 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[59-103] 11.647 - T[110-160] 10.27 - T[167-211] 17.337 - T[901-940] 8.725 |
| CDD |
P_trefoil_dom (IPR000519) - T[59-103] 8.48445E-5 - T[167-209] 3.13351E-12 |
| Pfam |
P_trefoil_dom (IPR000519) - T[61-101] 1.7E-5 - T[112-157] 1.9E-4 - T[169-209] 2.7E-13 |
| ProSitePatterns |
P_trefoil_CS (IPR017957) - T[68-88] . |
| PRINTS |
P_trefoil_chordata (IPR017994) - T[174-186] 8.8E-8 - T[186-198] 8.8E-8 - T[198-210] 8.8E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|