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TRANSCRIPT CARD

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  1. Clone 'man21m16' > 
  2. Transcript 'Boleac.CG.SB_v3.S327...' > 
  3. Transcript 'KH2012:KH.C11.112.v3...' > 
  4. Transcript 'KH2012:KH.C11.112.v2...'

Transcript Model

Transcript Id

KH2012:KH.C11.112.v2.A.SL2-1

Possible name(s)

IPO13; XPO1; XPO5

Gene model

KH2012:KH.C11.112

Location

KhC11 [2,009,595 / 2,023,026]

Sequences

Amino acid sequence

Length: 834

>KH.C11.112.v2.A.SL2-1
WNQEVHCGFNNQDFIRCRSHEEVFDFSQDQMTQVKAKHLKDSMCNEFSDIFQLCQFVMDN
SQNAPLVNATLSTLLCFLNWIPLGYIFETELITQLIYKFLNLPMFRNVTLKCITEIAGVS
VAGKYDEQFVKLFSHTMQQLKQMLPPNINMKVAYANGSDTEQNFIQNLALFLCTYLKEHG
QLVEKQDMRPHLLDVRLVMISRMAKPEEVLVVENEQGEVVREFMKDTDSINLYKNMRETL
GKFFYKKIANMEMKCLDFQGVNGSEWSWKNLNTLCWAIGSISGAMHEEDEKRFLKRGKDN
KAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR
RHFVQMQAGEVMPFIEEILSNINTIICDLQPQQVHTFYEAVGFMISAQTDSVVQEHLIEK
YMLLPNQVWDSIIQKATKDVDVLKDPPTVKQLGSILKTNVRAGKAVGHSFVQQLGRIYLD
MLNVYKCLSENISSAIQQNGEGVMKQPLIRSMRTVKKETLKLISGWVSRATDPEMVAENF
VPPLLEAVLIDYRTNVPAAREPEVLSTIATIVNKLEGAITKEIGQIFDAVFECTLEMINK
DFEEFPEYRTNFFLLLQAVNNHCFPALLSIPQPQFKLVLDSIIWAFKHTMRNVAHTGLSI
LYQLLQNITLVDDAAQSFYQMYFTDILQHVFSVGTDTSHTAGLTMHASILAYMFSLVEQN
KITVPLHANQPNNLVFVQEYVANLLKTAFPHLQDAQIKLFVRGLFSLNHDIALFKDHLRD
FLVQIKEFAGEDTTDLFLEEREATLSKAQEEKRRAQMAVPGIVNPHEVNEEMQD

Nucleotide sequence

Length: 3,165

>KH2012:KH.C11.112.v2.A.SL2-1
CTCACATCATCAACACATTATGCCTCCCATTGCCATGTCTGTCAATGTGACACAACAACA
TGGCCAACAACTACTTGATTTTGGTCAGAAGTTGGATATATCTTTGTTGGATAGTGTGGT
TGGTTGTTTATACAACGGCGAAGGACAATCACAAAGAATTGCTGAGAATATATTGACTGC
ACTGAAAGAACACCCGGAATCATGGACTAGGGTTGATACTATTTTAGAATATTCGCAGAA
TCAACAAACCAAGTACTATGCTCTACAAATCTTGGAAAATGTTATAAAAACCAGATGGAA
AGTTTTACCAAGGAATCAATGTGATGGAATCAAGAAGTACATTGTGGCTTTAATAATCAA
GACTTCATCAGATGCCGCTCTCATGAAGAAGTTTTTGATTTCTCACAAGATCAGATGACA
CAAGTAAAAGCAAAGCACTTAAAGGACAGCATGTGTAATGAGTTTTCTGATATATTTCAG
CTATGTCAGTTTGTAATGGATAATTCTCAAAATGCACCACTGGTCAACGCTACACTCAGC
ACTCTACTTTGCTTTTTAAACTGGATTCCTCTCGGCTACATATTTGAAACTGAACTAATA
ACCCAACTAATATATAAGTTTTTGAATCTTCCCATGTTTAGAAATGTGACGCTAAAGTGC
ATTACAGAAATAGCTGGTGTAAGTGTTGCTGGTAAATATGATGAACAATTTGTCAAGCTG
TTTTCGCACACAATGCAACAACTGAAGCAGATGTTACCACCAAATATAAACATGAAGGTT
GCGTATGCAAATGGTTCTGATACTGAGCAGAACTTTATTCAAAACCTTGCATTGTTTCTG
TGCACCTACCTCAAAGAGCACGGTCAGCTTGTGGAAAAACAAGACATGCGACCACATTTA
CTTGATGTTAGGTTGGTCATGATAAGCAGAATGGCAAAACCTGAAGAAGTGTTGGTTGTC
GAGAATGAACAAGGGGAAGTGGTTCGTGAGTTCATGAAAGACACAGACTCCATTAACCTT
TACAAAAACATGAGAGAAACATTAGGTAAGTTTTTTTATAAAAAAATTGCAAATATGGAA
ATGAAATGTTTGGATTTCCAAGGGGTGAATGGGTCAGAGTGGTCGTGGAAGAACTTAAAC
ACATTATGCTGGGCCATTGGAAGCATCAGTGGTGCCATGCATGAGGAGGATGAAAAACGT
TTTCTTAAGAGAGGGAAAGATAACAAAGCGATCATCGCGTCAAACATTATGTACGTTGTC
GGGCAGTATCCTCGCTTCTTACGTGCTCATTGGAGATTTTTGAAAACTGTTGTTAACAAG
TTGTTTGAGTTCATGCATGAAACTCATGATGGTGTACAAGACATGGCGTGCGACACCTTT
ATTAAGATTGCACAGAAATGTCGGCGACACTTTGTGCAAATGCAAGCAGGAGAAGTGATG
CCGTTTATTGAAGAAATTTTATCAAATATCAACACCATCATATGTGATTTACAACCACAA
CAAGTTCACACGTTTTACGAAGCTGTCGGTTTCATGATCAGTGCACAAACAGATTCAGTC
GTTCAGGAACACTTGATTGAAAAATACATGTTACTGCCAAACCAGGTATGGGACAGCATT
ATTCAGAAAGCTACCAAAGATGTGGATGTACTTAAGGATCCCCCCACAGTAAAACAACTT
GGCAGCATCTTAAAAACAAATGTTCGAGCTGGAAAAGCTGTTGGACACAGCTTTGTTCAA
CAGCTTGGTCGTATATACCTTGATATGCTGAACGTTTACAAATGTTTAAGTGAAAACATT
TCATCTGCAATTCAACAAAATGGTGAAGGTGTTATGAAACAACCTCTTATTAGAAGCATG
AGGACGGTTAAGAAGGAAACACTTAAGTTAATATCAGGATGGGTTAGCAGAGCTACTGAC
CCAGAAATGGTGGCAGAAAACTTTGTTCCACCATTATTAGAAGCTGTGTTGATTGATTAC
CGGACAAATGTGCCCGCTGCTCGAGAACCTGAAGTCTTAAGCACCATTGCCACTATTGTT
AATAAACTTGAGGGTGCAATAACAAAAGAAATCGGTCAAATCTTTGATGCTGTCTTTGAA
TGCACCCTTGAAATGATTAACAAAGATTTTGAAGAATTCCCTGAATACAGAACTAACTTC
TTCTTACTGTTGCAGGCTGTAAACAACCACTGCTTCCCTGCTTTACTCAGCATACCTCAA
CCTCAGTTTAAACTTGTCCTTGACTCCATTATATGGGCCTTCAAGCATACTATGAGAAAT
GTGGCTCATACAGGTTTGAGCATTCTGTACCAGTTGCTGCAGAATATTACATTGGTGGAT
GATGCAGCACAAAGTTTTTACCAAATGTACTTTACTGATATTTTACAGCACGTTTTCAGT
GTTGGCACTGACACCTCTCACACTGCAGGTTTGACGATGCATGCATCCATACTTGCCTAC
ATGTTTAGTTTAGTTGAACAGAATAAGATAACAGTGCCACTACACGCCAATCAACCCAAC
AATTTAGTATTTGTGCAGGAATATGTGGCCAATCTGCTGAAAACAGCATTCCCCCACCTT
CAAGATGCCCAAATAAAGTTATTTGTACGAGGACTGTTCAGTCTGAACCACGATATTGCT
TTGTTTAAAGACCATCTACGAGACTTCCTTGTTCAGATCAAGGAGTTTGCTGGGGAAGAC
ACGACCGACTTGTTCTTGGAAGAAAGAGAGGCGACTCTTTCAAAGGCGCAAGAGGAAAAA
CGACGAGCGCAGATGGCTGTACCTGGCATTGTAAATCCACATGAAGTCAATGAAGAAATG
CAGGACTGAGTTGACGACAATGTAGTAAACTTGTGGTTGTAATTATTCCTGCTGGCCACC
GGGGGTCAGACAGGACGGCTTGTGCTGTTTCACCATTCGACGGGATCACGACTTGATTTT
CGAACATCCAGTATCAACTTGTATAATATGTTGTTTAAATAAAAATAGTGCTTATCAATA
TAGGTTTACGCATTAGTACAGAACACGACCAGGGTTTGCAACCAATTGTGATCCAGCAAC
TTGTACATTTTCTTTTCAAACTTTTATGTTTGTCGCTTGATTCTCAAATTATTTTTGTTA
GTTTTGGAAAACGGAAGCAATAAACCATTTGTTAAAAAGTCTCAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[17-188] 1.7E-54 - T[189-818] 8.1E-279
Pfam
Exportin-1/Importin-b-like (IPR013598) - T[20-113] 1.1E-22
SUPERFAMILY
ARM-type_fold (IPR016024) - T[37-696] 1.15E-60 - T[472-790] 1.13E-117 - T[770-802] 1.15E-60
Pfam
CRM1_C_dom (IPR014877) - T[473-790] 6.1E-130
SMART
CRM1_C_dom (IPR014877) - T[473-790] 4.3E-209

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
XPO1_HUMAN 79.58 % 1085 0