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TRANSCRIPT CARD

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  1. Clone 'cilv041p17'
  2. Transcript 'KH2012:KH.C11.112.v3...'

Transcript Model

Transcript Id

KH2012:KH.C11.112.v3.A.nonSL6-1

Possible name(s)

IPO13; XPO1; XPO5

Location

KhC11 [2,008,697 / 2,023,026]

Sequences

Amino acid sequence

Length: 834

>KH.C11.112.v3.A.nonSL6-1
WNQEVHCGFNNQDFIRCRSHEEVFDFSQDQMTQVKAKHLKDSMCNEFSDIFQLCQFVMDN
SQNAPLVNATLSTLLCFLNWIPLGYIFETELITQLIYKFLNLPMFRNVTLKCITEIAGVS
VAGKYDEQFVKLFSHTMQQLKQMLPPNINMKVAYANGSDTEQNFIQNLALFLCTYLKEHG
QLVEKQDMRPHLLDVRLVMISRMAKPEEVLVVENEQGEVVREFMKDTDSINLYKNMRETL
GKFFYKKIANMEMKCLDFQGVNGSEWSWKNLNTLCWAIGSISGAMHEEDEKRFLKRGKDN
KAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR
RHFVQMQAGEVMPFIEEILSNINTIICDLQPQQVHTFYEAVGFMISAQTDSVVQEHLIEK
YMLLPNQVWDSIIQKATKDVDVLKDPPTVKQLGSILKTNVRAGKAVGHSFVQQLGRIYLD
MLNVYKCLSENISSAIQQNGEGVMKQPLIRSMRTVKKETLKLISGWVSRATDPEMVAENF
VPPLLEAVLIDYRTNVPAAREPEVLSTIATIVNKLEGAITKEIGQIFDAVFECTLEMINK
DFEEFPEYRTNFFLLLQAVNNHCFPALLSIPQPQFKLVLDSIIWAFKHTMRNVAHTGLSI
LYQLLQNITLVDDAAQSFYQMYFTDILQHVFSVGTDTSHTAGLTMHASILAYMFSLVEQN
KITVPLHANQPNNLVFVQEYVANLLKTAFPHLQDAQIKLFVRGLFSLNHDIALFKDHLRD
FLVQIKEFAGEDTTDLFLEEREATLSKAQEEKRRAQMAVPGIVNPHEVNEEMQD

Nucleotide sequence

Length: 3,389

>KH2012:KH.C11.112.v3.A.nonSL6-1
AGTTGAAATTGCGAAGAAATTTGTAGCTGGTAAGACTATAGGGTGAATGATTAGTAATTT
CATTGTGAAAGGACCGAAATTGCTTGTATTTACAACGCCTTATCTATTCGTTAGTGCTAT
TCGAAGCCAAGGCAGTGGCGGGAAATTTAAAATTTGTTATTAAAGAACTCGCAAGGCAAT
CGTTAAGAGGCAAAGTTAAACTTACAATTTCGCTTATACCTAACCTCACATCATCAACAC
ATTATGCCTCCCATTGCCATGTCTGTCAATGTGACACAACAACATGGCCAACAACTACTT
GATTTTGGTCAGAAGTTGGATATATCTTTGTTGGATAGTGTGGTTGGTTGTTTATACAAC
GGCGAAGGACAATCACAAAGAATTGCTGAGAATATATTGACTGCACTGAAAGAACACCCG
GAATCATGGACTAGGGTTGATACTATTTTAGAATATTCGCAGAATCAACAAACCAAGTAC
TATGCTCTACAAATCTTGGAAAATGTTATAAAAACCAGATGGAAAGTTTTACCAAGGAAT
CAATGTGATGGAATCAAGAAGTACATTGTGGCTTTAATAATCAAGACTTCATCAGATGCC
GCTCTCATGAAGAAGTTTTTGATTTCTCACAAGATCAGATGACACAAGTAAAAGCAAAGC
ACTTAAAGGACAGCATGTGTAATGAGTTTTCTGATATATTTCAGCTATGTCAGTTTGTAA
TGGATAATTCTCAAAATGCACCACTGGTCAACGCTACACTCAGCACTCTACTTTGCTTTT
TAAACTGGATTCCTCTCGGCTACATATTTGAAACTGAACTAATAACCCAACTAATATATA
AGTTTTTGAATCTTCCCATGTTTAGAAATGTGACGCTAAAGTGCATTACAGAAATAGCTG
GTGTAAGTGTTGCTGGTAAATATGATGAACAATTTGTCAAGCTGTTTTCGCACACAATGC
AACAACTGAAGCAGATGTTACCACCAAATATAAACATGAAGGTTGCGTATGCAAATGGTT
CTGATACTGAGCAGAACTTTATTCAAAACCTTGCATTGTTTCTGTGCACCTACCTCAAAG
AGCACGGTCAGCTTGTGGAAAAACAAGACATGCGACCACATTTACTTGATGTTAGGTTGG
TCATGATAAGCAGAATGGCAAAACCTGAAGAAGTGTTGGTTGTCGAGAATGAACAAGGGG
AAGTGGTTCGTGAGTTCATGAAAGACACAGACTCCATTAACCTTTACAAAAACATGAGAG
AAACATTAGGTAAGTTTTTTTATAAAAAAATTGCAAATATGGAAATGAAATGTTTGGATT
TCCAAGGGGTGAATGGGTCAGAGTGGTCGTGGAAGAACTTAAACACATTATGCTGGGCCA
TTGGAAGCATCAGTGGTGCCATGCATGAGGAGGATGAAAAACGTTTTCTTAAGAGAGGGA
AAGATAACAAAGCGATCATCGCGTCAAACATTATGTACGTTGTCGGGCAGTATCCTCGCT
TCTTACGTGCTCATTGGAGATTTTTGAAAACTGTTGTTAACAAGTTGTTTGAGTTCATGC
ATGAAACTCATGATGGTGTACAAGACATGGCGTGCGACACCTTTATTAAGATTGCACAGA
AATGTCGGCGACACTTTGTGCAAATGCAAGCAGGAGAAGTGATGCCGTTTATTGAAGAAA
TTTTATCAAATATCAACACCATCATATGTGATTTACAACCACAACAAGTTCACACGTTTT
ACGAAGCTGTCGGTTTCATGATCAGTGCACAAACAGATTCAGTCGTTCAGGAACACTTGA
TTGAAAAATACATGTTACTGCCAAACCAGGTATGGGACAGCATTATTCAGAAAGCTACCA
AAGATGTGGATGTACTTAAGGATCCCCCCACAGTAAAACAACTTGGCAGCATCTTAAAAA
CAAATGTTCGAGCTGGAAAAGCTGTTGGACACAGCTTTGTTCAACAGCTTGGTCGTATAT
ACCTTGATATGCTGAACGTTTACAAATGTTTAAGTGAAAACATTTCATCTGCAATTCAAC
AAAATGGTGAAGGTGTTATGAAACAACCTCTTATTAGAAGCATGAGGACGGTTAAGAAGG
AAACACTTAAGTTAATATCAGGATGGGTTAGCAGAGCTACTGACCCAGAAATGGTGGCAG
AAAACTTTGTTCCACCATTATTAGAAGCTGTGTTGATTGATTACCGGACAAATGTGCCCG
CTGCTCGAGAACCTGAAGTCTTAAGCACCATTGCCACTATTGTTAATAAACTTGAGGGTG
CAATAACAAAAGAAATCGGTCAAATCTTTGATGCTGTCTTTGAATGCACCCTTGAAATGA
TTAACAAAGATTTTGAAGAATTCCCTGAATACAGAACTAACTTCTTCTTACTGTTGCAGG
CTGTAAACAACCACTGCTTCCCTGCTTTACTCAGCATACCTCAACCTCAGTTTAAACTTG
TCCTTGACTCCATTATATGGGCCTTCAAGCATACTATGAGAAATGTGGCTCATACAGGTT
TGAGCATTCTGTACCAGTTGCTGCAGAATATTACATTGGTGGATGATGCAGCACAAAGTT
TTTACCAAATGTACTTTACTGATATTTTACAGCACGTTTTCAGTGTTGGCACTGACACCT
CTCACACTGCAGGTTTGACGATGCATGCATCCATACTTGCCTACATGTTTAGTTTAGTTG
AACAGAATAAGATAACAGTGCCACTACACGCCAATCAACCCAACAATTTAGTATTTGTGC
AGGAATATGTGGCCAATCTGCTGAAAACAGCATTCCCCCACCTTCAAGATGCCCAAATAA
AGTTATTTGTACGAGGACTGTTCAGTCTGAACCACGATATTGCTTTGTTTAAAGACCATC
TACGAGACTTCCTTGTTCAGATCAAGGAGTTTGCTGGGGAAGACACGACCGACTTGTTCT
TGGAAGAAAGAGAGGCGACTCTTTCAAAGGCGCAAGAGGAAAAACGACGAGCGCAGATGG
CTGTACCTGGCATTGTAAATCCACATGAAGTCAATGAAGAAATGCAGGACTGAGTTGACG
ACAATGTAGTAAACTTGTGGTTGTAATTATTCCTGCTGGCCACCGGGGGTCAGACAGGAC
GGCTTGTGCTGTTTCACCATTCGACGGGATCACGACTTGATTTTCGAACATCCAGTATCA
ACTTGTATAATATGTTGTTTAAATAAAAATAGTGCTTATCAATATAGGTTTACGCATTAG
TACAGAACACGACCAGGGTTTGCAACCAATTGTGATCCAGCAACTTGTACATTTTCTTTT
CAAACTTTTATGTTTGTCGCTTGATTCTCAAATTATTTTTGTTAGTTTTGGAAAACGGAA
GCAATAAACCATTTGTTAAAAAGTCTCAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[17-188] 1.7E-54 - T[189-818] 8.1E-279
Pfam
Exportin-1/Importin-b-like (IPR013598) - T[20-113] 1.1E-22
SUPERFAMILY
ARM-type_fold (IPR016024) - T[37-696] 1.15E-60 - T[472-790] 1.13E-117 - T[770-802] 1.15E-60
Pfam
CRM1_C_dom (IPR014877) - T[473-790] 6.1E-130
SMART
CRM1_C_dom (IPR014877) - T[473-790] 4.3E-209

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
XPO1_HUMAN 79.58 % 1085 0