- Molecular Tool 'Ci-Bra(251bp)/Ci-Sna' >
- Transcript 'KH2012:KH.C1.1124.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1124.v1.A.nonSL2-1
Possible name(s)
SLC6A14; SLC6A5; SLC6A9
Gene model
Location
KhC1 [4,039,736 / 4,045,429]
Amino acid sequence
Length: 667
>KH.C1.1124.v1.A.nonSL2-1
TLQTYITMGNKDENQDRGNWDNKADYLLSCIGYAVGLGNVWRFPYLAFENGGGAFLIPYI
IMLVFAGLPIFFMEVALGQFSSLGPTSVWKFNPMFKGVGICMVVLSAFVGIYYNVIIAYT
VFYFFSSLTSNLPWETCDNWWNNQTTCRTSFELVCNLNFTGVGLNAPAASYIDSNQAQFR
GSGPVYQQVPKEYATNVSVMLGQQNGSSYGCSSFFALRGTSASEEYWNKYALRLADDIYP
SSNGPVNSHLALSLIVAWIVVFYSLIKGIKSSGKVVYFTALFPYVVLLILLIRGATLEGA
YDGVQYYIGSQSDLSKLQDAEVWKAAATQIFFSLSAAWGGLIALSSYNKFKNNCFYDAVL
VCTVNCGTSLFAGFAIFTVVGHMAHRLGRPVNEVVQSGFGLAFVAYPEAIAQLPVSPLWA
ILFFLMLFTLGLDSQFTILETVSTAITDSFPRQFRSRRWQLMLMLSVVMFLLGLVCVTNT
GLYWVNLIDHYAAGWGLLFVAVMELFGVCYIYGGNRFIEDIEMMIGKKNWWFWLYWRACW
FFISPLLLTAILVWSLATFDTKSIGGYEYPEFATVIGWLIIATAIIFVPIFGIVAIVKNK
GSVFKASSPASDWGPYLKEHRGVRYANMDEPEEALAIAEERNQHESEKGKGNPVYAHDNG
ETEQTKM
Nucleotide sequence
Length: 2,785
>KH2012:KH.C1.1124.v1.A.nonSL2-1
AGTTCAACGTTGAACACTTCAGACGTATATCACTATGGGGAATAAAGACGAAAATCAAGA
TCGTGGTAACTGGGACAATAAAGCTGACTACTTGTTGTCATGTATTGGATACGCAGTTGG
ACTTGGCAATGTATGGCGGTTTCCCTACCTTGCTTTCGAAAATGGAGGGGGTGCCTTTCT
CATTCCATACATTATTATGTTGGTGTTTGCTGGCTTGCCAATATTTTTCATGGAAGTCGC
TCTCGGTCAGTTTTCGAGTCTTGGGCCAACCTCTGTGTGGAAATTTAACCCAATGTTTAA
AGGTGTCGGCATATGCATGGTTGTCCTGAGTGCGTTTGTCGGCATTTACTACAACGTGAT
CATCGCTTATACCGTGTTCTATTTCTTCTCATCTTTAACATCGAATCTACCATGGGAGAC
TTGTGATAACTGGTGGAACAACCAAACTACATGTCGCACCAGTTTTGAGCTAGTTTGTAA
CCTAAACTTTACCGGAGTAGGTCTGAATGCACCTGCGGCTTCTTATATTGATAGTAACCA
GGCACAGTTCAGAGGCTCCGGGCCTGTTTATCAGCAAGTTCCTAAGGAGTATGCTACGAA
TGTAAGTGTAATGTTGGGGCAGCAAAACGGGTCATCGTACGGTTGTTCCAGCTTTTTTGC
CCTTCGAGGAACAAGCGCAAGTGAAGAATATTGGAACAAATATGCATTGCGCCTGGCTGA
TGACATCTACCCGTCTAGCAATGGACCAGTGAATTCTCACCTTGCCTTGTCTCTTATCGT
GGCTTGGATAGTAGTTTTCTACAGCTTGATAAAGGGAATCAAATCTTCTGGAAAGGTCGT
TTACTTTACCGCTCTCTTCCCGTACGTGGTTTTGTTGATTTTGTTGATCAGAGGTGCGAC
ATTGGAAGGTGCTTACGATGGTGTGCAGTATTATATTGGAAGCCAATCTGACTTGAGCAA
GTTACAAGATGCAGAGGTTTGGAAAGCAGCAGCTACTCAGATTTTCTTTTCCCTGAGTGC
GGCATGGGGTGGTTTGATTGCCCTTTCATCTTACAACAAGTTCAAAAACAACTGCTTCTA
TGATGCGGTACTTGTGTGTACGGTAAACTGCGGCACTTCACTCTTCGCTGGTTTTGCTAT
TTTTACGGTTGTTGGTCACATGGCACATCGACTTGGAAGACCTGTAAACGAAGTTGTGCA
GTCAGGATTTGGATTGGCCTTTGTCGCATATCCCGAAGCAATAGCCCAGTTACCCGTTTC
GCCGTTGTGGGCCATCCTCTTTTTCCTCATGTTGTTCACCCTTGGCCTCGACAGTCAATT
CACGATTCTTGAAACTGTCAGCACGGCAATTACAGATTCGTTCCCACGCCAGTTCCGCAG
TAGAAGATGGCAGTTGATGCTGATGCTATCGGTCGTTATGTTCCTCCTTGGCCTCGTGTG
CGTTACTAATACCGGGTTATACTGGGTAAACCTAATCGATCACTACGCTGCTGGTTGGGG
ATTGCTCTTTGTGGCAGTTATGGAACTTTTTGGAGTTTGTTACATCTATGGTGGGAATCG
TTTCATTGAAGACATCGAAATGATGATCGGGAAGAAGAATTGGTGGTTCTGGTTGTATTG
GAGAGCATGTTGGTTCTTCATATCACCGTTGCTGTTAACGGCGATCTTAGTTTGGTCTCT
TGCGACGTTTGATACCAAATCTATCGGAGGTTATGAGTATCCAGAATTCGCGACAGTGAT
TGGTTGGCTCATCATTGCAACTGCTATCATTTTCGTTCCAATATTTGGCATCGTGGCTAT
TGTGAAAAATAAAGGAAGTGTATTCAAGGCTTCGTCCCCTGCATCAGACTGGGGACCTTA
CCTAAAAGAACATCGTGGTGTAAGGTATGCCAATATGGATGAACCGGAGGAGGCATTAGC
AATTGCTGAAGAAAGAAACCAGCATGAGAGCGAGAAAGGAAAGGGCAATCCAGTGTATGC
ACATGACAACGGTGAAACTGAACAAACTAAGATGTAAACATGATGTGTAGTTTTACAATT
CATGCTGTAAATAAACTTTTCACCTGATGGTGCTACAAAGGGAATTTAAACTATACTGAA
TCATCAATTATATAGGTCTACAACTTACACAAAGTAACTCCAAAGGACTTAATACATTTC
GCGTCTATTATAGTATCATTTTACCACTTGGCAGTTTTTATAACAGTATCTTGTAATATT
AATAACTTATGTTAATATATAGTAGGCCAAGTAGGGTGATGGAAGATGGGACACCTTTTC
ATACTATTTTCTCGTCCAATTTAGTAATATTCAAAGAAGTATTAAACCGTATTCTCACGA
CTCCCATGAACCTTTGTTAATTATTCTAACCACGATAGGGATATTTGGATATCATGTGCT
AAATGTGTCCCATCTTACCCCACAGTACTATCATAGTACACTTCAGTATACTATGGTACT
ATTATCACCGTATTTTACAAAACAAAATCTTACATTTAAAACCTAATGTAAATAGCCGGG
TAATAATTGTGTTTTTTACGTACATGTACCTAATCGCATTTTAAATACAGAATAACAAAA
TTATGTTTATTGCACACTGGTGATATATTGCGCTCTTCCAATTAGGCATCTGCACAAATC
GTACACACACAAAATTGGGCATGTGGAACTGTGGGTTTAAAACGTAAAAGCATCGATATA
GAAAAAAAAATCACATCAGTCACTATTAATAACAAGCAAGCATTGAAACACTTAACATGA
ACAATAAATTAATTTTTTCATCTAG
| PANTHER |
Na/ntran_symport (IPR000175) - T[11-606] 7.3E-243 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[16-601] 99.4 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[17-146] 7.32E-169 - T[221-596] 7.32E-169 |
| Pfam |
Na/ntran_symport (IPR000175) - T[17-149] 1.6E-61 - T[218-597] 1.4E-132 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[25-46] 2.6E-54 - T[54-73] 2.6E-54 - T[97-123] 2.6E-54 - T[413-432] 2.6E-54 - T[494-514] 2.6E-54 - T[537-557] 2.6E-54 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[41-55] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A5_HUMAN | 48.243 % | 582 | 0 |
| SC6A9_HUMAN | 43.968 % | 513 | 2.01E-174 |
| S6A14_HUMAN | 55.292 % | 682 | 0 |