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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'KH2012:KH.C1.1124.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1124.v1.A.nonSL3-1

Possible name(s)

SLC6A14; SLC6A5; SLC6A9

Location

KhC1 [4,039,736 / 4,045,438]

Sequences

Amino acid sequence

Length: 667

>KH.C1.1124.v1.A.nonSL3-1
TLQTYITMGNKDENQDRGNWDNKADYLLSCIGYAVGLGNVWRFPYLAFENGGGAFLIPYI
IMLVFAGLPIFFMEVALGQFSSLGPTSVWKFNPMFKGVGICMVVLSAFVGIYYNVIIAYT
VFYFFSSLTSNLPWETCDNWWNNQTTCRTSFELVCNLNFTGVGLNAPAASYIDSNQAQFR
GSGPVYQQVPKEYATNVSVMLGQQNGSSYGCSSFFALRGTSASEEYWNKYALRLADDIYP
SSNGPVNSHLALSLIVAWIVVFYSLIKGIKSSGKVVYFTALFPYVVLLILLIRGATLEGA
YDGVQYYIGSQSDLSKLQDAEVWKAAATQIFFSLSAAWGGLIALSSYNKFKNNCFYDAVL
VCTVNCGTSLFAGFAIFTVVGHMAHRLGRPVNEVVQSGFGLAFVAYPEAIAQLPVSPLWA
ILFFLMLFTLGLDSQFTILETVSTAITDSFPRQFRSRRWQLMLMLSVVMFLLGLVCVTNT
GLYWVNLIDHYAAGWGLLFVAVMELFGVCYIYGGNRFIEDIEMMIGKKNWWFWLYWRACW
FFISPLLLTAILVWSLATFDTKSIGGYEYPEFATVIGWLIIATAIIFVPIFGIVAIVKNK
GSVFKASSPASDWGPYLKEHRGVRYANMDEPEEALAIAEERNQHESEKGKGNPVYAHDNG
ETEQTKM

Nucleotide sequence

Length: 2,794

>KH2012:KH.C1.1124.v1.A.nonSL3-1
GTTGTATTCAGTTCAACGTTGAACACTTCAGACGTATATCACTATGGGGAATAAAGACGA
AAATCAAGATCGTGGTAACTGGGACAATAAAGCTGACTACTTGTTGTCATGTATTGGATA
CGCAGTTGGACTTGGCAATGTATGGCGGTTTCCCTACCTTGCTTTCGAAAATGGAGGGGG
TGCCTTTCTCATTCCATACATTATTATGTTGGTGTTTGCTGGCTTGCCAATATTTTTCAT
GGAAGTCGCTCTCGGTCAGTTTTCGAGTCTTGGGCCAACCTCTGTGTGGAAATTTAACCC
AATGTTTAAAGGTGTCGGCATATGCATGGTTGTCCTGAGTGCGTTTGTCGGCATTTACTA
CAACGTGATCATCGCTTATACCGTGTTCTATTTCTTCTCATCTTTAACATCGAATCTACC
ATGGGAGACTTGTGATAACTGGTGGAACAACCAAACTACATGTCGCACCAGTTTTGAGCT
AGTTTGTAACCTAAACTTTACCGGAGTAGGTCTGAATGCACCTGCGGCTTCTTATATTGA
TAGTAACCAGGCACAGTTCAGAGGCTCCGGGCCTGTTTATCAGCAAGTTCCTAAGGAGTA
TGCTACGAATGTAAGTGTAATGTTGGGGCAGCAAAACGGGTCATCGTACGGTTGTTCCAG
CTTTTTTGCCCTTCGAGGAACAAGCGCAAGTGAAGAATATTGGAACAAATATGCATTGCG
CCTGGCTGATGACATCTACCCGTCTAGCAATGGACCAGTGAATTCTCACCTTGCCTTGTC
TCTTATCGTGGCTTGGATAGTAGTTTTCTACAGCTTGATAAAGGGAATCAAATCTTCTGG
AAAGGTCGTTTACTTTACCGCTCTCTTCCCGTACGTGGTTTTGTTGATTTTGTTGATCAG
AGGTGCGACATTGGAAGGTGCTTACGATGGTGTGCAGTATTATATTGGAAGCCAATCTGA
CTTGAGCAAGTTACAAGATGCAGAGGTTTGGAAAGCAGCAGCTACTCAGATTTTCTTTTC
CCTGAGTGCGGCATGGGGTGGTTTGATTGCCCTTTCATCTTACAACAAGTTCAAAAACAA
CTGCTTCTATGATGCGGTACTTGTGTGTACGGTAAACTGCGGCACTTCACTCTTCGCTGG
TTTTGCTATTTTTACGGTTGTTGGTCACATGGCACATCGACTTGGAAGACCTGTAAACGA
AGTTGTGCAGTCAGGATTTGGATTGGCCTTTGTCGCATATCCCGAAGCAATAGCCCAGTT
ACCCGTTTCGCCGTTGTGGGCCATCCTCTTTTTCCTCATGTTGTTCACCCTTGGCCTCGA
CAGTCAATTCACGATTCTTGAAACTGTCAGCACGGCAATTACAGATTCGTTCCCACGCCA
GTTCCGCAGTAGAAGATGGCAGTTGATGCTGATGCTATCGGTCGTTATGTTCCTCCTTGG
CCTCGTGTGCGTTACTAATACCGGGTTATACTGGGTAAACCTAATCGATCACTACGCTGC
TGGTTGGGGATTGCTCTTTGTGGCAGTTATGGAACTTTTTGGAGTTTGTTACATCTATGG
TGGGAATCGTTTCATTGAAGACATCGAAATGATGATCGGGAAGAAGAATTGGTGGTTCTG
GTTGTATTGGAGAGCATGTTGGTTCTTCATATCACCGTTGCTGTTAACGGCGATCTTAGT
TTGGTCTCTTGCGACGTTTGATACCAAATCTATCGGAGGTTATGAGTATCCAGAATTCGC
GACAGTGATTGGTTGGCTCATCATTGCAACTGCTATCATTTTCGTTCCAATATTTGGCAT
CGTGGCTATTGTGAAAAATAAAGGAAGTGTATTCAAGGCTTCGTCCCCTGCATCAGACTG
GGGACCTTACCTAAAAGAACATCGTGGTGTAAGGTATGCCAATATGGATGAACCGGAGGA
GGCATTAGCAATTGCTGAAGAAAGAAACCAGCATGAGAGCGAGAAAGGAAAGGGCAATCC
AGTGTATGCACATGACAACGGTGAAACTGAACAAACTAAGATGTAAACATGATGTGTAGT
TTTACAATTCATGCTGTAAATAAACTTTTCACCTGATGGTGCTACAAAGGGAATTTAAAC
TATACTGAATCATCAATTATATAGGTCTACAACTTACACAAAGTAACTCCAAAGGACTTA
ATACATTTCGCGTCTATTATAGTATCATTTTACCACTTGGCAGTTTTTATAACAGTATCT
TGTAATATTAATAACTTATGTTAATATATAGTAGGCCAAGTAGGGTGATGGAAGATGGGA
CACCTTTTCATACTATTTTCTCGTCCAATTTAGTAATATTCAAAGAAGTATTAAACCGTA
TTCTCACGACTCCCATGAACCTTTGTTAATTATTCTAACCACGATAGGGATATTTGGATA
TCATGTGCTAAATGTGTCCCATCTTACCCCACAGTACTATCATAGTACACTTCAGTATAC
TATGGTACTATTATCACCGTATTTTACAAAACAAAATCTTACATTTAAAACCTAATGTAA
ATAGCCGGGTAATAATTGTGTTTTTTACGTACATGTACCTAATCGCATTTTAAATACAGA
ATAACAAAATTATGTTTATTGCACACTGGTGATATATTGCGCTCTTCCAATTAGGCATCT
GCACAAATCGTACACACACAAAATTGGGCATGTGGAACTGTGGGTTTAAAACGTAAAAGC
ATCGATATAGAAAAAAAAATCACATCAGTCACTATTAATAACAAGCAAGCATTGAAACAC
TTAACATGAACAATAAATTAATTTTTTCATCTAG

InterProScan

PANTHER
Na/ntran_symport (IPR000175) - T[11-606] 7.3E-243
ProSiteProfiles
Na/ntran_symport (IPR000175) - T[16-601] 99.4
SUPERFAMILY
SNS_sf (IPR037272) - T[17-146] 7.32E-169 - T[221-596] 7.32E-169
Pfam
Na/ntran_symport (IPR000175) - T[17-149] 1.6E-61 - T[218-597] 1.4E-132
PRINTS
Na/ntran_symport (IPR000175) - T[25-46] 2.6E-54 - T[54-73] 2.6E-54 - T[97-123] 2.6E-54 - T[413-432] 2.6E-54 - T[494-514] 2.6E-54 - T[537-557] 2.6E-54
ProSitePatterns
Na/ntran_symport (IPR000175) - T[41-55] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC6A5_HUMAN 48.243 % 582 0
SC6A9_HUMAN 43.968 % 513 2.01E-174
S6A14_HUMAN 55.292 % 682 0





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