- Transcript 'KH2012:KH.C11.146.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.146.v1.A.SL4-1
Possible name(s)
PUF60; U2AF2
Gene model
Location
KhC11 [738,766 / 741,892]
Amino acid sequence
Length: 488
>KH.C11.146.v1.A.SL4-1
LNIWLNMAELGVNNYQDPSFTKQDPGYNNGDGQYGPTEPEPRSRDDKRDRDRDRGSSGRH
RDRKRSRDRDRKKRSRSRSRGRRHRSKSRERKRRSRSRERPEKKPKKAYKYWDVPPVGYE
HVTPLQYKAMQAAGQIPLMATSQTMGSITAEATLQVPVAGSQMTRQARRLYVGNIPFGVT
EDAMMDFFNNQMQIAGLAQAPGQPILAVQINLDKNFAFLEFRSVDETTQALAFDGINFMN
QSLKIRRPSDYKPLPGSLEQPAIHLPGVISTVVQDSQHKMFIGGLPNYLNDDQVKELLTS
FGPLRAFNLVKDSATALSKGYAFAEFADYSLTDQAIAGLNGMQLGDKKLIVQRASIGAKN
NPHGAIMAPVTLQIPGMAHATGAGPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGK
LGSVVSLEIPRPGPGLTEADGVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPE
RYHHRQFS
Nucleotide sequence
Length: 1,905
>KH2012:KH.C11.146.v1.A.SL4-1
TCAAAACACATTTTACTGACTGAAAAAGTTTGCAACAAATCTTTCAAAGTAATTGGCTTT
AACTCAATATCTGGTTAAACATGGCTGAATTGGGCGTGAATAATTACCAAGACCCGAGTT
TTACTAAGCAGGACCCCGGGTACAACAATGGTGACGGTCAATATGGTCCCACTGAACCAG
AGCCGCGGTCCCGAGATGATAAACGTGATCGTGACCGAGATCGCGGAAGTTCGGGTAGAC
ACCGAGATCGTAAACGGAGCCGTGACCGCGATCGTAAGAAGAGGAGCAGAAGTCGGAGCA
GAGGAAGAAGGCACCGGTCAAAAAGCAGAGAGCGTAAACGAAGATCAAGAAGTCGAGAAC
GCCCCGAGAAGAAACCAAAAAAAGCTTACAAATATTGGGACGTGCCACCAGTTGGTTACG
AACATGTCACACCACTACAATACAAAGCAATGCAGGCAGCGGGTCAAATTCCATTGATGG
CAACTTCTCAAACTATGGGGAGCATTACAGCAGAAGCAACGCTCCAGGTTCCTGTGGCTG
GAAGTCAAATGACACGACAAGCACGTCGTCTTTACGTTGGCAACATCCCCTTCGGTGTCA
CTGAAGACGCTATGATGGATTTCTTCAACAACCAGATGCAGATCGCCGGTCTTGCACAAG
CACCCGGTCAACCAATTCTCGCAGTGCAGATTAATCTGGATAAAAATTTCGCTTTTCTCG
AGTTCAGGTCAGTTGACGAGACTACACAGGCCTTGGCGTTCGATGGAATCAACTTCATGA
ACCAATCACTGAAGATCCGTCGCCCAAGTGATTACAAACCACTGCCAGGATCCTTGGAGC
AACCTGCTATTCATCTACCTGGTGTGATATCTACTGTAGTCCAAGATTCTCAGCACAAGA
TGTTTATTGGAGGTTTGCCGAATTATCTTAACGACGATCAAGTGAAGGAGCTGTTGACAT
CCTTTGGGCCGCTACGTGCATTTAACTTGGTCAAGGACAGTGCTACTGCTCTATCTAAAG
GGTATGCTTTCGCCGAGTTTGCAGATTATTCCTTGACTGACCAAGCTATTGCCGGCCTTA
ATGGAATGCAACTTGGGGACAAGAAATTGATTGTGCAACGTGCAAGCATCGGTGCAAAGA
ATAATCCACATGGAGCAATTATGGCACCAGTTACACTACAGATTCCCGGCATGGCTCACG
CGACAGGTGCAGGCCCCGCAACAACCGTGTTGTGTTTGATGAACATGGTTCTTCCGGAGG
AGTTGACAGATGACGAGGAATATGAGGAGATCATGGAAGATGTAAAAGATGAGTGCGGAA
AACTTGGATCTGTTGTCAGTCTTGAGATTCCGCGCCCCGGGCCTGGATTAACAGAAGCTG
ACGGCGTTGGTAAAATTTATGTTGAGTTTGCAAACCATCTCGACACGCAGAAGGCAGCAC
AAGCTCTTTCTGGTAGAAAGTTCTCCAACAGAGTTGTGGTGACTTCGTTCTTCGATCCAG
AGCGTTATCACCACCGTCAGTTTAGTTAGAGACGAAAGTAAACAATACTGGAGCAATTTT
CTGTTGAATGGACCTAATTTCGGTTGTACAGCCAACTTATCCATTGACGATTTTTATTTC
AGTTGTCGGAAACTGCCATTTTGAAAAACTTATTAGAATGTCAAAAAAAAATCGTGAATT
GCAACTTTTGGTTAAATAGGCCTAAATTTTTTAATGGTTTTGTAAGTAATTCAAATTGGG
CTGTGAAGTTGCAACGCGATATAACATTAATGTCTGTGTTTCTTGAAATTAGTTTTTAAG
CACGAGATGATTTTATGCTGTAGTGGAGAATATCAGTAATTCAACTTTCACTCTTGTAAT
AAATTTGGTCCCTTTGTTATTTCAAGGTAAATAAAAACAAACGAA
| TIGRFAM |
U2AF_lg (IPR006529) - T[42-487] 4.6E-145 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[168-252] 1.28E-18 - T[277-366] 6.11E-26 - T[395-481] 6.11E-26 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[168-253] 1.7E-59 - T[254-257] 1.7E-59 - T[278-329] 1.7E-59 - T[330-351] 1.7E-59 - T[384-488] 1.4E-30 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[168-250] 13.243 - T[278-356] 15.971 - T[388-479] 9.149 |
| SMART |
RRM_dom (IPR000504) - T[169-246] 3.5E-11 - T[279-352] 5.3E-17 - T[389-475] 1.1 |
| Pfam |
RRM_dom (IPR000504) - T[170-243] 3.4E-6 - T[281-349] 1.5E-15 - T[412-472] 4.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 70.455 % | 531 | 0 |