- Transcript 'KH2012:KH.C11.148.v2...' >
- Transcript 'KH2012:KH.C11.148.v2...' >
- Transcript 'KH2012:KH.C11.148.v1...' >
- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'KH2012:KH.C11.148.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.148.v2.A.nonSL29-1
Possible name(s)
RPSA
Gene model
Location
KhC11 [4,606,090 / 4,607,572]
Amino acid sequence
Length: 284
>KH.C11.148.v2.A.nonSL29-1
VTKMLSATTHIGAPNCDFQMEQYVYKQRQDGVFIINLKKTWEKIMLAARAIVAIENPADI
CVISSRQYGQRAILKFASATGATPFAGRFTPGAFTNQIQAAFREPRLLIVTDPRADHQPI
TESSYVNIPLIALCNTDSPIRYVDICIPCNNKSKHSVGLMWWLLAREVLRLRGTIPRSQP
WDVMCDLYFYRDAEEIEKDEQVAAEKEHQKELEVETTQPEWGTEQVQQDWAESSIQPIPG
ADITAPQPAGHIPAVDDWASAPPPMKTDGTGDWKTTGNEEWGGF
Nucleotide sequence
Length: 977
>KH2012:KH.C11.148.v2.A.nonSL29-1
ACGTAACGAAAATGCTTTCGGCCACCACGCATATTGGTGCGCCGAACTGCGATTTTCAAA
TGGAGCAGTATGTTTACAAGCAGCGTCAGGACGGTGTCTTTATTATTAACTTGAAAAAGA
CATGGGAGAAGATCATGCTTGCAGCTCGTGCTATTGTAGCCATTGAAAACCCAGCTGATA
TCTGTGTTATATCATCCAGGCAGTATGGTCAGAGAGCTATCTTGAAATTCGCTAGCGCAA
CAGGCGCTACCCCGTTTGCTGGAAGATTCACTCCAGGAGCGTTCACTAACCAGATCCAAG
CTGCTTTCCGTGAGCCACGTCTTTTGATCGTCACTGATCCCCGTGCTGATCATCAGCCAA
TCACTGAATCATCCTACGTGAACATCCCGTTGATCGCTTTGTGCAACACCGATTCTCCGA
TCCGATATGTCGACATCTGCATCCCATGCAACAACAAGTCCAAGCACTCTGTCGGCCTCA
TGTGGTGGCTTCTTGCACGAGAAGTCCTCCGTTTGAGAGGAACCATCCCAAGATCCCAAC
CCTGGGACGTGATGTGCGATCTTTACTTCTACAGAGATGCAGAAGAGATTGAAAAGGATG
AACAAGTGGCAGCAGAGAAGGAACACCAGAAGGAATTGGAGGTTGAAACTACCCAACCAG
AATGGGGAACCGAGCAAGTTCAGCAAGATTGGGCCGAGTCTTCCATCCAACCAATCCCAG
GAGCAGACATCACCGCTCCTCAACCAGCCGGCCACATTCCTGCTGTTGATGATTGGGCAT
CTGCTCCGCCTCCAATGAAAACTGATGGCACCGGAGATTGGAAGACAACCGGGAATGAGG
AGTGGGGAGGTTTCTAATCTTCTGACGACAGCTTCATAACAGCCATCTTTAAGTTGGAGC
TCATTTTCAATGCGGCAAAGTTTCGTACTTGGAAACAATATATAAAAAACTCAATAAAAA
TCCTCCAACATTGAAAG
| Hamap |
Ribosomal_S2_euk (IPR027498) - T[1-261] 50.045 |
| PRINTS |
Ribosomal_S2 (IPR001865) - T[1-19] 2.8E-30 - T[31-40] 2.8E-30 - T[80-97] 2.8E-30 - T[105-122] 2.8E-30 - T[122-133] 2.8E-30 - T[143-157] 2.8E-30 |
| PANTHER |
Ribosomal_S2_euk/arc (IPR005707) - T[1-233] 5.5E-129 |
| ProSitePatterns |
Ribosomal_S2_CS (IPR018130) - T[1-12] . - T[105-129] . |
| SUPERFAMILY |
Ribosomal_S2_flav_dom_sf (IPR023591) - T[2-186] 1.31E-70 |
| TIGRFAM |
Ribosomal_S2_euk/arc (IPR005707) - T[2-191] 1.8E-87 |
| CDD |
Ribosomal_S2 (IPR001865) - T[4-170] 1.29849E-69 |
| Pfam |
Ribosomal_S2 (IPR001865) - T[4-98] 3.0E-9 - T[100-168] 5.7E-13 |
| Pfam |
40S_SA_C (IPR032281) - T[188-275] 9.9E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RSSA_HUMAN | 64.041 % | 370 | 6.89E-130 |