- Transcript 'KH2012:KH.C13.121.v1...' >
- Transcript 'KH2012:KH.C11.148.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.148.v2.A.nonSL5-1
Possible name(s)
RPSA
Gene model
Location
KhC11 [4,606,044 / 4,607,572]
Amino acid sequence
Length: 300
>KH.C11.148.v2.A.nonSL5-1
VNMSGGIEALQLKEDDVTKMLSATTHIGAPNCDFQMEQYVYKQRQDGVFIINLKKTWEKI
MLAARAIVAIENPADICVISSRQYGQRAILKFASATGATPFAGRFTPGAFTNQIQAAFRE
PRLLIVTDPRADHQPITESSYVNIPLIALCNTDSPIRYVDICIPCNNKSKHSVGLMWWLL
AREVLRLRGTIPRSQPWDVMCDLYFYRDAEEIEKDEQVAAEKEHQKELEVETTQPEWGTE
QVQQDWAESSIQPIPGADITAPQPAGHIPAVDDWASAPPPMKTDGTGDWKTTGNEEWGGF
Nucleotide sequence
Length: 1,023
>KH2012:KH.C11.148.v2.A.nonSL5-1
GTCAATATGTCTGGGGGCATTGAGGCTTTACAACTAAAAGAAGATGACGTAACGAAAATG
CTTTCGGCCACCACGCATATTGGTGCGCCGAACTGCGATTTTCAAATGGAGCAGTATGTT
TACAAGCAGCGTCAGGACGGTGTCTTTATTATTAACTTGAAAAAGACATGGGAGAAGATC
ATGCTTGCAGCTCGTGCTATTGTAGCCATTGAAAACCCAGCTGATATCTGTGTTATATCA
TCCAGGCAGTATGGTCAGAGAGCTATCTTGAAATTCGCTAGCGCAACAGGCGCTACCCCG
TTTGCTGGAAGATTCACTCCAGGAGCGTTCACTAACCAGATCCAAGCTGCTTTCCGTGAG
CCACGTCTTTTGATCGTCACTGATCCCCGTGCTGATCATCAGCCAATCACTGAATCATCC
TACGTGAACATCCCGTTGATCGCTTTGTGCAACACCGATTCTCCGATCCGATATGTCGAC
ATCTGCATCCCATGCAACAACAAGTCCAAGCACTCTGTCGGCCTCATGTGGTGGCTTCTT
GCACGAGAAGTCCTCCGTTTGAGAGGAACCATCCCAAGATCCCAACCCTGGGACGTGATG
TGCGATCTTTACTTCTACAGAGATGCAGAAGAGATTGAAAAGGATGAACAAGTGGCAGCA
GAGAAGGAACACCAGAAGGAATTGGAGGTTGAAACTACCCAACCAGAATGGGGAACCGAG
CAAGTTCAGCAAGATTGGGCCGAGTCTTCCATCCAACCAATCCCAGGAGCAGACATCACC
GCTCCTCAACCAGCCGGCCACATTCCTGCTGTTGATGATTGGGCATCTGCTCCGCCTCCA
ATGAAAACTGATGGCACCGGAGATTGGAAGACAACCGGGAATGAGGAGTGGGGAGGTTTC
TAATCTTCTGACGACAGCTTCATAACAGCCATCTTTAAGTTGGAGCTCATTTTCAATGCG
GCAAAGTTTCGTACTTGGAAACAATATATAAAAAACTCAATAAAAATCCTCCAACATTGA
AAG
| PANTHER |
Ribosomal_S2_euk/arc (IPR005707) - T[3-249] 3.4E-134 |
| Hamap |
Ribosomal_S2_euk (IPR027498) - T[4-277] 53.296 |
| SUPERFAMILY |
Ribosomal_S2_flav_dom_sf (IPR023591) - T[11-202] 9.03E-72 |
| TIGRFAM |
Ribosomal_S2_euk/arc (IPR005707) - T[13-207] 1.9E-88 |
| ProSitePatterns |
Ribosomal_S2_CS (IPR018130) - T[17-28] . - T[121-145] . |
| PRINTS |
Ribosomal_S2 (IPR001865) - T[17-35] 3.7E-30 - T[47-56] 3.7E-30 - T[96-113] 3.7E-30 - T[121-138] 3.7E-30 - T[138-149] 3.7E-30 - T[159-173] 3.7E-30 |
| CDD |
Ribosomal_S2 (IPR001865) - T[20-186] 2.21408E-69 |
| Pfam |
Ribosomal_S2 (IPR001865) - T[114-184] 4.7E-13 |
| Pfam |
40S_SA_C (IPR032281) - T[204-291] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RSSA_HUMAN | 63.725 % | 389 | 3.26E-137 |