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TRANSCRIPT CARD

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  1. Clone 'cima867146' > 
  2. Transcript 'KH2012:KH.C12.327.v1...' > 
  3. Clone 'citb5d22' > 
  4. Clone 'cilv042b08' > 
  5. Transcript 'KH2012:KH.C11.151.v3...'

Transcript Model

Transcript Id

KH2012:KH.C11.151.v3.A.ND2-1

Possible name(s)

C3; C4B; C5

Gene model

KH2012:KH.C11.151

Location

KhC11 [3,869,600 / 3,871,930]

Sequences

Amino acid sequence

Length: 328

>KH.C11.151.v3.A.ND2-1
VVMSSTVTTPRKGKTKLEAILSNYERLTQLDCHDGRTKRNLYLVSIPNSIELSDLNGVTI
KLEDGFSGDITLADAGQPALEYKSNANPDVIKHQVIVNKENSTNTYLMKSLDECVTFSEK
LSVEIPNSVYCLPRPQPPLKPTGMKRRLKLFGGEIKAPTSKPKSRKNDLMDSSVGELNNT
TEGKVKLDIGESGKSPKKKKKKQKSEKLDGYQSLDDFEISEPGKILKKEKKKRKLGTEDE
ISHEASKTGKENIKNEPKEVEKSPKKKKKQKSEKSDHDQSLKKKKKKKSKHQDSMAIKPI
ILMNFKIHFYQAVNNNRKTQKRNWKIPI

Nucleotide sequence

Length: 1,686

>KH2012:KH.C11.151.v3.A.ND2-1
TTTACCTTGCTTTTATATGCAGAATATACTTACTGAGTAGTTATGTCAAGTACTGTTACG
ACCCCAAGAAAAGGGAAAACTAAATTAGAAGCGATATTAAGCAACTATGAACGTTTGACA
CAACTTGATTGCCATGACGGAAGAACAAAACGTAATCTTTATCTTGTTTCAATTCCAAAT
TCCATTGAACTGAGTGATTTAAACGGGGTAACTATTAAGTTGGAAGATGGTTTTAGTGGC
GATATCACTTTGGCTGATGCAGGACAGCCTGCATTGGAATATAAGTCCAATGCAAACCCA
GACGTGATAAAACACCAGGTTATAGTCAACAAAGAAAATTCTACGAACACATATTTAATG
AAGTCATTGGACGAGTGTGTTACTTTCAGTGAAAAATTGTCGGTCGAAATACCAAACTCT
GTTTATTGCCTACCAAGGCCACAGCCCCCTTTAAAACCTACAGGCATGAAACGAAGGCTG
AAGTTGTTTGGCGGGGAGATAAAAGCACCTACTTCTAAACCTAAATCAAGGAAAAATGAC
CTAATGGACAGTAGCGTTGGTGAACTTAATAACACGACTGAAGGAAAAGTAAAACTAGAT
ATTGGTGAATCGGGAAAAAGTCCCAAAAAGAAGAAAAAAAAGCAAAAATCTGAAAAACTT
GACGGCTATCAAAGCCTTGATGATTTCGAAATTAGTGAACCTGGAAAAATTCTAAAAAAA
GAGAAAAAGAAAAGAAAATTGGGAACGGAAGATGAAATTTCTCATGAGGCGAGTAAAACC
GGAAAAGAAAATATTAAAAATGAGCCTAAAGAAGTGGAAAAAAGTCCTAAAAAGAAGAAA
AAACAAAAATCTGAAAAGTCCGATCACGACCAAAGTTTAAAAAAGAAAAAGAAAAAAAAA
TCGAAACATCAGGATTCAATGGCAATCAAGCCAATCATACTGATGAATTTCAAGATTCAT
TTTTATCAAGCGGTCAACAACAACAGGAAGACACAGAAGAGAAACTGGAAAATTCCTATT
TGAATGATTTGGAAGCCAAGTTAAAACGGATACAAAACATGAACAAGAAATCTGTAAAAG
CAAAAGATATGCTGGAATCTTTAGAGTTTAAAAGACAGCATCAATATGAAGAATTGCTAA
GTGATCACATGGAAAATACGGCAGATCTCTTCTGTGATGATTTGGATTCTACAACTCCAG
CAGACCACTCATATTTTGACATCGGTAGAAAACTTTACCCAGAACAACAAGCTTTGAATA
AAGTGGAGGTTCTTGCTTTGTTGAAACATGACCTACTTTCACAACAAAATAATGAAACGG
TTGGAGAACTTGAGCAAGATGGTAATGACAGATAACAGGTAGTGGTTTTTCCTAGTTTTG
TGTGATTTTGGCATGTACTGTGAAAAATTCCCACATAAAAATCATATATTTTCTCATTTA
TGTGTCAATATTTATTTTATGTTGTTCAGTTATCATTACTTTAAAAAAAAGACAATATTG
GAGCAAGAAAAGTTGAAAATTTTAAACTTTGTATTTAGTAGTAAGACTTTTATTGTACCA
GTTAAAATGTAATGTACACTAATACTTTTATTTGAGTGTCAGTGCATAAACATAATGTTT
CTGTCTAACACAAAGTGTGGTCAATAATGTTATTTATCAGAAAATCGCATTGAAAAGAAT
GTTTAT

InterProScan

Pfam
DNA-dir_RNA_pol1_su_RPA34 (IPR013240) - T[38-234] 2.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value