- Clone 'cima876501' >
- Transcript 'KH2012:KH.C1.1165.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1165.v1.A.ND1-1
Possible name(s)
DLL1; JAG2
Gene model
Location
KhC1 [2,289,918 / 2,299,641]
Amino acid sequence
Length: 593
>KH.C1.1165.v1.A.ND1-1
RVKTLYLSIKFEFLIVYAAYNKMYFKLVLFGIAMFGAVQINANAINATTPDPCSLFNPCL
HNGRCYSPSPDIRACDCNVGYYGSVCQFVDHCASNPCANNGTCIRLDNGYNCTCNEGYLG
RTCEVLDACIKGPCSNGGICTTNMTTGSPMCDCVGLYTGKSCEIHCYTPQDCGEQSIHCV
FRSGLVVCRCVTPVGKKSAKCILPEDRVDECQSNPCQGRGRCRDMDIGYQCRCYIGFVGK
NCEMRAYCSYENPCQNRGTCQQLKHGRNYRCNCPPNFAGRNCEIYIAPVCSVTCTSSAIQ
VSCDHSRLPKEIRSQTLETISPLPSQQCTCRFPVVPGQPVRQHRYRYTGYSSRTTPATPT
PCTIPFDSCGTQLKIVNNTIYYLNHLRYGSLQSHDQTTDSLVTREYGQFELKLECSSPLL
VKSNGGVLTSNIMDIEESLELKSKSNIPIQISVSYWGVQPNTFLTHGTTLAPITEFKLDT
RIYVLLSGDPSYSTTAILTMQIYPVTCYLLTNTTTYNNKYYLFEDGCKRDETVRMELLLM
NQQQGTLFQRNVPKTLFSFEAATFKRENDVQVVCSALICNSPECEVPCAGMNE
Nucleotide sequence
Length: 2,066
>KH2012:KH.C1.1165.v1.A.ND1-1
AGAGTTAAAACTTTATATTTATCGATTAAATTCGAATTCTTAATAGTGTATGCAGCTTAC
AATAAAATGTATTTCAAACTTGTTTTGTTTGGTATTGCTATGTTTGGAGCAGTGCAAATA
AATGCTAACGCAATTAATGCCACGACTCCTGACCCTTGCAGTTTATTCAACCCATGTTTA
CACAATGGTAGATGCTATTCACCTTCACCTGACATAAGAGCTTGTGATTGTAATGTTGGA
TATTACGGCTCAGTTTGTCAGTTTGTGGATCACTGTGCATCTAATCCCTGCGCTAATAAT
GGTACCTGTATTAGACTTGATAATGGCTACAACTGTACCTGCAATGAAGGTTATTTAGGG
AGAACATGTGAGGTATTGGACGCATGCATTAAAGGGCCCTGCTCTAATGGAGGCATTTGC
ACCACTAATATGACTACTGGCTCTCCTATGTGTGATTGCGTAGGCTTATATACTGGGAAG
TCATGTGAGATTCATTGCTACACTCCACAAGATTGTGGAGAACAGTCTATTCATTGTGTT
TTTAGATCTGGTCTAGTTGTTTGTCGGTGTGTTACTCCTGTTGGGAAAAAGTCAGCCAAG
TGTATTTTACCAGAAGATCGCGTCGATGAGTGCCAATCAAACCCATGTCAAGGACGTGGA
AGATGTCGTGACATGGACATAGGGTATCAGTGTCGCTGCTATATTGGTTTCGTGGGAAAA
AACTGCGAAATGAGAGCTTACTGTTCATATGAAAATCCATGTCAAAACAGAGGAACTTGT
CAACAACTTAAGCATGGTAGAAACTATAGGTGTAACTGCCCACCTAACTTTGCTGGTCGC
AACTGTGAAATATACATTGCGCCAGTTTGTTCAGTGACATGCACATCATCTGCCATCCAA
GTTTCTTGTGACCACTCTCGTCTCCCAAAAGAAATTCGATCGCAAACACTTGAAACAATA
TCCCCCCTTCCCTCCCAGCAGTGCACATGCAGGTTTCCTGTTGTGCCAGGGCAGCCTGTA
CGCCAACACAGATATAGATATACTGGCTACAGCTCCAGGACTACACCTGCCACCCCTACA
CCGTGTACCATTCCATTTGATTCCTGCGGTACTCAACTGAAGATAGTAAACAACACCATC
TACTATCTAAACCACCTGCGATACGGCTCACTGCAGTCACATGATCAAACTACAGACTCA
CTGGTAACAAGAGAGTACGGCCAATTTGAGCTCAAGCTAGAATGTAGTTCTCCATTACTG
GTCAAGTCTAATGGTGGCGTATTAACTAGCAACATTATGGACATTGAAGAATCACTGGAG
TTAAAGTCCAAATCAAATATTCCGATTCAGATTAGTGTGTCGTACTGGGGGGTTCAACCA
AATACTTTTCTTACTCACGGCACCACACTTGCACCTATTACCGAGTTCAAACTGGACACA
AGAATTTACGTTTTGCTGTCTGGTGACCCAAGTTACAGCACGACTGCCATCTTGACAATG
CAGATTTACCCTGTCACCTGTTATCTACTAACTAACACTACAACTTACAACAACAAGTAT
TATCTCTTTGAAGATGGCTGCAAAAGGGATGAAACAGTAAGGATGGAGCTGCTTTTAATG
AACCAGCAGCAGGGTACTTTGTTTCAAAGAAATGTTCCGAAAACTTTGTTCAGTTTTGAA
GCTGCGACTTTTAAACGGGAGAATGATGTGCAAGTTGTGTGCAGCGCACTCATCTGCAAT
AGTCCTGAATGCGAAGTACCATGCGCTGGGATGAATGAATAAACAAGAAATGTCAATAAT
CACATTGCATGCCTTTTATTGTATTTTTCGTTCATATATTTTTTGTGTAAAAAAAGGAAA
ACGTTTTGGTTTGCAGAACAAATTTTTTTTTGAGTAGTCTTGCGAATCAATTAATGCTAA
TCATGCTGCACAAAAAAGTATAAAGAAACGGTATTACTTCAGGCAAATATGCATGTTTTA
TCAATTTAGTGCTCTATCATAGGCTGTAACTATGTTGCAATGCATTCAATTTCATTGCCG
AAATAAACTAACTGCATGTCACTGGA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[49-87] 16.517 - T[88-124] 20.784 - T[125-163] 17.674 - T[207-243] 20.431 - T[244-283] 19.627 |
| SMART |
EGF-like_dom (IPR000742) - T[52-87] 0.016 - T[91-124] 9.9E-7 - T[128-163] 0.0087 - T[210-243] 4.1E-5 - T[247-283] 9.2E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[75-86] . - T[75-86] . - T[112-123] . - T[112-123] . - T[151-162] . - T[231-242] . - T[231-242] . - T[271-282] . |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[89-124] 1.6E-4 - T[207-243] 2.2E-6 - T[248-283] 0.59 |
| Pfam |
EGF-like_dom (IPR000742) - T[92-120] 2.0E-7 - T[211-241] 6.1E-7 - T[251-281] 2.7E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[222-233] . |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[293-593] 11.685 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRUM2_HUMAN | 32.258 % | 114 | 2.97E-26 |
| JAG2_HUMAN | 32.364 % | 118 | 1.29E-27 |
| DLL1_HUMAN | 33.333 % | 117 | 1.5E-27 |