- Transcript 'KH2012:KH.C2.602.v1....' >
- Transcript 'KH2012:KH.C1.1179.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1179.v1.A.ND1-1
Possible name(s)
C3; C5; CD109
Gene model
Location
KhC1 [8,335,014 / 8,362,599]
Amino acid sequence
Length: 1,946
>KH.C1.1179.v1.A.ND1-1
LETVETKLSIMKPAVICIIFLCIGLGHGLSLILPWRRVPVPQFSFPRLQVSLPVIRPAVF
RPLPTTSRPTFSPRTTAAPLLSRGQGHTLIVPKAFKVGIRSTVILNLYGYTSATVSAYVT
VIRSWATQHICSSSCKNTYCISAQQSNTISISDIVSKNIGRKVEVVISCVRATFTFTKRV
QVLIDRNSGYLFVQTDRPIYRPNERVEIRTYPLQQDMSPEKNAMVQVIVKTPDGIGVNKV
ERQLPASGFIDTTFHVAEHPMFGTWFVQAKYVSKAFTTTAEATFAVRKYVVPTFNVQLEL
ERNYILISDSHITGKIMANYSYGLPVSGNYFLSMKLKRSQNGEPQEFYKMPGNGTLKANF
RNGIQRFNVSVNLLLNILNPGETIADLAEMGATFCVEATVNSRADSIMESDVTADLQFLK
SPFIIDTSITSKYYIPPVAYTLQGIVTDAISLTPKQDIRIRISVASSTYTTTTNSNGKFV
TAFSLVGNGNQVVRIQTLDPDISNEQQARVNLTIQPYRSPSSSYLQILASRHTVTVRRMF
QLTFTFGSSRPTDIRYYVVARGGIVLSSVVRLTPLNRQKTINVWPTQAMVPFARVVAYYF
KDNEVVSGSLWFDVVDQCKRELSIEVAPLVTPGATFPIRITGAPHALVSVSGVDKAAYYL
YNGSRLTRDVMFKRMESHDQGCVRNGGEDWNHVFMGAGLSLYTSEQNPTIVDSLNCDRNS
RNKRNVELEDSVLLTSLNRKLQQCRRDGKRDAFVNETCEMRTARCGINYGDQYPGCCEVF
HQSCVQASLQDSGNEGEAEASVAQKRASFQGDSSPFAVEVEQPEGTILSQVSRPAVQSLG
QSLAPTRLPVFAVQAARPPFLAMVHTFLGMAPQPMAHRFVPNPFILSSRPTPPATTTTTT
TTTTTTTTTTTTTMSTTTATLPPVVNNPGRERSNFQERLSWPTIRIRPNGHITSYKTARD
SITTFVVGAVGMQDSPDGFCIAPTKEMKVFKDVFVQINLPYSIRKLEQAQLKITIFNYNA
QNNYTLRLHAKTDDTFCTTFKSGTWAQLGTFNIEAGGFASAPLTVIPLLIPLTGRSPIQL
KVVNDQTNVVQDSIRREVLIEPAGEMKDTYNSYPIDLSTGNQSIEIGLNFPEQINLESRK
CWIYAYASYMGPSIEVNQITQEPRSIASIFRQPYGCGEQNMLVTGPNVYAHMFLVTTGKM
APGSIRYEQSIRRMEDGFNQQMRYRSDLVGKRAWSVFSHYRPSTWLNAYVDRVFIQAQVY
YTEMDLTPVCRSLQWLVGEQHQEGYFLERSSVIHREMHGAVGGRYSLTAYVLVTLIEAQR
INCSGVNQQIQQSRDKAINYLRNNRNHPAFQRPYGLSILTYAMALHDQSSAFTIELNQRL
LGFQQLDDNSYVHWQAHSHSDIQGTDTHDYWYVRRPQAIDVETSAYALLAQVKLASSNNN
VQQSDLDTTRSIALWLISQRNEAGAFRSTQDTVVGLQALAEYMAWVSQVQPQSADVNIRI
QLRGPPNVAWSPSGDHIMNLDGQNVGFRTEVEVPAHIIGRGNIRAHISGSGEGIISNRCI
YRTSSAEGACHFNINHTVDFVPSPDGRVAEELPVKLRLTISKQVGSPAEASIVEVNLMSG
FSVVENDLQRMAISEAVDGLVDRYEITSSKVVLYLRRIGAEPTTLSFRMRQTVVVSKPQP
AKINVYDYYEPSISCGIFYSLPGEVDRLRTTQACTSGNTNELCKCAEGSCPVCRTREEQL
HNTTCLGSSGQDCLICQGGSCENMYRKACTSNYVYIATVTSQPRDAWTPGYTSFSVRVDE
VIKEGNDEISVDRNRIRQFTTRKECYEKCKDPVLAGPDRSEESQRYLKPNMKILLMSNFL
DFSMDRSGHVRHDYQMGEGTTVERIIPDSKCVQIRARVALPKFQCENPNFPRNPNRQAKC
DKMMKMKTSCDNMDRLKNQVQQGCDK
Nucleotide sequence
Length: 6,005
>KH2012:KH.C1.1179.v1.A.ND1-1
GCTAAATTTCGAAAAGTTCAGCTCTTTTTCGACAACTTGCTAAATTTCGAAAAAATTTAG
CTTTTTTTCCACAAGTTCATCATTTAGTTGGAAACAGTAGAAACAAAGTTGAGTATTATG
AAGCCAGCAGTGATTTGCATCATTTTTCTCTGTATTGGTCTCGGGCATGGATTAAGCTTG
ATACTGCCCTGGAGAAGGGTTCCAGTTCCACAATTTTCCTTTCCTCGCCTTCAAGTCTCA
CTTCCAGTTATCCGACCGGCAGTTTTTCGGCCTTTACCAACCACAAGTCGTCCGACATTT
AGTCCAAGAACAACAGCCGCTCCATTGTTAAGTAGGGGCCAAGGGCATACTCTCATAGTT
CCGAAAGCGTTTAAAGTGGGCATAAGATCAACAGTTATCCTGAACCTGTATGGATATACT
TCAGCAACTGTTTCTGCCTACGTTACGGTAATAAGATCCTGGGCGACGCAGCATATTTGC
TCAAGTTCCTGCAAGAACACTTACTGCATCTCAGCGCAACAGTCCAATACAATTTCAATT
TCAGACATCGTTTCGAAAAATATCGGAAGAAAAGTTGAAGTTGTTATATCTTGTGTGAGA
GCTACATTTACTTTCACAAAAAGGGTTCAAGTTTTGATTGACAGAAATAGTGGTTACCTG
TTTGTGCAGACTGATCGTCCTATATACAGACCAAATGAGCGAGTTGAAATCCGCACCTAT
CCCCTCCAGCAAGATATGTCCCCAGAAAAAAACGCAATGGTTCAAGTTATCGTAAAGACC
CCAGATGGTATTGGAGTGAATAAAGTAGAACGACAATTACCAGCGTCTGGTTTTATTGAC
ACAACTTTTCATGTAGCCGAACACCCCATGTTTGGGACTTGGTTTGTACAAGCAAAATAT
GTTTCAAAGGCGTTTACCACAACTGCTGAAGCAACTTTTGCTGTGCGAAAATACGTTGTT
CCTACATTCAACGTTCAACTTGAATTAGAAAGAAACTACATTCTGATCAGTGATTCACAT
ATTACAGGGAAAATTATGGCAAATTATAGTTACGGGTTGCCCGTGAGCGGAAATTATTTT
CTTTCTATGAAACTAAAGCGGTCACAGAATGGGGAACCCCAGGAGTTTTACAAAATGCCA
GGAAATGGCACTCTTAAAGCCAATTTCAGAAACGGTATTCAACGTTTTAACGTCTCGGTC
AATTTATTGCTGAACATTTTAAATCCGGGTGAAACAATTGCTGATTTAGCTGAGATGGGT
GCAACGTTCTGTGTTGAAGCTACTGTGAACTCAAGAGCAGATTCAATTATGGAATCTGAT
GTGACAGCAGATCTCCAGTTTCTTAAATCTCCTTTCATAATAGATACATCCATTACATCA
AAATATTACATTCCTCCAGTTGCATATACCTTACAAGGCATAGTTACGGATGCAATTTCC
TTAACTCCAAAGCAAGATATACGAATCCGCATATCAGTTGCTAGTTCGACTTATACCACG
ACCACCAACTCGAACGGTAAATTCGTCACTGCATTCAGTTTAGTAGGAAACGGAAATCAG
GTGGTTCGTATTCAAACTTTAGATCCTGATATAAGCAATGAGCAGCAGGCACGAGTTAAT
TTGACCATTCAACCATATAGGTCTCCATCCTCAAGTTATTTGCAGATACTGGCTTCTAGA
CACACTGTAACAGTTAGAAGAATGTTTCAGTTAACGTTTACCTTTGGCTCAAGCAGACCA
ACTGACATTCGATATTACGTTGTTGCTCGGGGCGGTATCGTGCTATCAAGTGTCGTGCGC
CTGACACCACTGAATCGGCAAAAAACCATAAATGTGTGGCCTACTCAGGCCATGGTTCCA
TTCGCAAGGGTCGTGGCTTATTATTTTAAAGACAATGAGGTGGTGTCCGGGTCACTCTGG
TTCGATGTGGTTGACCAATGCAAAAGAGAATTGTCAATTGAAGTTGCCCCACTTGTTACA
CCTGGTGCAACTTTCCCAATTAGAATAACAGGTGCACCGCACGCGCTGGTAAGCGTCTCA
GGCGTGGATAAAGCAGCGTATTACTTGTACAATGGAAGTCGTTTGACACGGGACGTCATG
TTTAAAAGGATGGAGTCACATGACCAAGGTTGCGTCAGAAATGGTGGGGAAGATTGGAAT
CATGTGTTTATGGGTGCTGGGCTAAGCTTGTACACATCAGAACAAAACCCCACAATCGTA
GATTCCTTGAACTGCGATAGAAACAGCAGAAATAAAAGGAATGTTGAGCTTGAAGACTCA
GTGTTGTTAACATCATTGAATCGAAAGTTACAGCAATGCCGGCGTGATGGTAAACGTGAC
GCGTTTGTGAATGAAACTTGCGAAATGCGAACTGCAAGATGTGGTATTAACTATGGTGAC
CAGTACCCTGGTTGCTGTGAGGTGTTTCACCAATCCTGTGTTCAAGCTTCACTTCAGGAT
TCTGGTAACGAAGGTGAAGCAGAAGCAAGCGTGGCTCAAAAACGAGCTTCGTTTCAGGGA
GATTCGTCTCCATTTGCTGTCGAAGTAGAACAGCCAGAGGGGACAATTCTTAGCCAAGTA
AGCCGGCCAGCAGTTCAATCCCTTGGACAATCTTTGGCTCCAACACGCCTTCCCGTCTTT
GCTGTACAAGCCGCTCGTCCTCCATTTTTAGCTATGGTCCACACATTTTTAGGTATGGCC
CCACAACCTATGGCCCACAGATTTGTCCCTAATCCGTTTATTCTGTCCTCGAGACCAACA
CCGCCAGCAACAACAACAACTACAACAACAACTACGACGACAACAACAACAACTACAACA
ACAACAATGAGCACGACAACTGCCACGTTGCCACCTGTAGTGAACAACCCTGGGCGTGAA
AGATCAAATTTCCAAGAACGCTTATCGTGGCCGACGATCAGAATTCGACCGAATGGTCAT
ATAACTTCTTATAAGACAGCTCGTGATAGCATCACTACTTTTGTTGTTGGTGCAGTTGGT
ATGCAGGACTCGCCAGATGGATTTTGCATTGCACCAACGAAAGAGATGAAAGTTTTCAAA
GACGTTTTCGTGCAAATTAATCTTCCGTATTCGATCCGTAAATTGGAACAAGCTCAATTG
AAAATAACAATATTTAACTACAATGCACAAAACAACTACACGTTGCGACTTCATGCTAAA
ACAGATGACACATTTTGTACAACATTTAAATCAGGGACATGGGCTCAGCTTGGGACGTTT
AATATTGAAGCTGGTGGTTTTGCATCTGCGCCATTGACAGTTATACCACTACTAATACCT
TTAACTGGGAGGTCACCAATTCAACTTAAAGTAGTTAACGACCAAACCAATGTAGTTCAG
GATTCCATTAGAAGGGAAGTACTAATAGAGCCAGCTGGTGAAATGAAGGATACGTATAAT
AGCTACCCTATAGACCTGAGCACAGGAAACCAAAGCATTGAGATTGGACTTAATTTCCCA
GAGCAGATAAATCTGGAATCAAGAAAGTGCTGGATTTATGCTTATGCAAGTTACATGGGG
CCGAGCATTGAGGTGAATCAAATTACACAAGAACCTCGAAGCATTGCAAGTATTTTCAGA
CAACCTTATGGATGTGGGGAACAAAACATGTTGGTTACAGGGCCAAATGTATACGCTCAT
ATGTTCCTTGTTACAACGGGGAAAATGGCGCCTGGTTCAATACGTTATGAACAATCTATT
AGACGAATGGAGGATGGTTTCAACCAACAGATGAGGTACAGAAGTGACTTAGTTGGAAAG
AGAGCTTGGTCAGTGTTTTCACATTACAGACCGAGCACTTGGCTAAATGCTTACGTGGAC
AGAGTCTTCATACAAGCACAGGTTTACTACACAGAGATGGATTTGACCCCAGTTTGTCGA
TCACTGCAGTGGTTGGTAGGTGAGCAACATCAGGAAGGCTATTTCTTGGAAAGATCGTCG
GTTATTCACAGAGAAATGCATGGTGCAGTTGGAGGGCGATATTCACTCACAGCCTATGTA
CTTGTTACACTGATTGAAGCACAAAGAATCAATTGCAGCGGAGTAAACCAACAGATCCAA
CAGTCACGAGATAAAGCGATAAATTATTTACGAAATAATCGCAACCATCCAGCTTTCCAA
AGACCGTACGGACTTTCTATATTGACATATGCGATGGCTCTGCATGACCAGTCTTCTGCC
TTTACAATTGAGTTAAATCAAAGACTTCTCGGTTTTCAACAATTAGATGACAACTCCTAC
GTCCATTGGCAAGCCCATAGCCACAGTGATATACAAGGGACGGACACGCACGATTATTGG
TACGTGAGGAGACCACAAGCAATAGACGTTGAAACATCAGCTTATGCTCTCCTTGCACAA
GTTAAACTGGCAAGCAGCAACAACAACGTACAACAATCTGACCTTGATACCACAAGATCT
ATTGCTTTATGGTTGATCAGTCAACGTAACGAAGCTGGTGCTTTTAGATCGACGCAAGAC
ACAGTGGTTGGATTACAAGCTCTTGCTGAATACATGGCCTGGGTCAGCCAAGTGCAACCC
CAATCTGCTGACGTCAATATAAGAATACAATTGCGTGGACCGCCTAACGTAGCATGGAGT
CCTTCAGGTGACCATATCATGAACTTAGATGGTCAGAATGTTGGTTTCCGTACAGAAGTA
GAGGTACCAGCACATATCATTGGACGTGGCAATATTAGAGCACATATATCTGGAAGTGGC
GAAGGCATAATCTCCAACCGATGTATCTACCGAACATCATCTGCTGAAGGTGCTTGCCAT
TTCAACATCAACCATACAGTAGATTTTGTTCCTTCACCTGATGGTAGGGTGGCTGAGGAA
TTGCCAGTTAAGCTTCGGTTAACAATATCCAAACAAGTGGGTTCCCCTGCTGAGGCTTCT
ATAGTTGAAGTTAATCTGATGTCAGGATTTTCTGTCGTCGAAAACGACCTGCAGCGAATG
GCAATTTCCGAGGCAGTAGATGGATTGGTTGACCGATATGAAATTACGAGCAGTAAAGTT
GTTTTATATCTGAGAAGAATTGGAGCTGAACCGACCACATTGTCGTTCCGTATGCGACAA
ACTGTGGTGGTATCAAAACCACAACCAGCGAAAATTAACGTGTACGATTATTATGAGCCA
TCGATAAGTTGTGGAATATTTTATTCCTTACCTGGTGAAGTGGACCGGTTACGAACAACT
CAAGCGTGCACAAGCGGTAACACAAACGAGTTGTGTAAATGTGCTGAAGGTTCATGTCCT
GTTTGCAGAACACGTGAAGAGCAACTACACAACACAACTTGTCTTGGAAGTAGTGGCCAA
GACTGTTTAATATGCCAGGGTGGCTCGTGTGAGAATATGTACAGAAAAGCTTGTACAAGC
AACTACGTTTACATTGCCACAGTAACAAGCCAACCAAGAGATGCTTGGACACCCGGGTAC
ACGAGTTTCTCAGTTCGTGTGGATGAGGTCATTAAAGAAGGTAATGATGAAATCAGTGTT
GACCGTAACCGCATTCGGCAGTTTACCACAAGGAAAGAATGTTATGAAAAATGTAAAGAC
CCCGTTTTAGCTGGACCTGATCGTTCTGAAGAGAGTCAACGATATTTGAAACCAAACATG
AAAATTTTGTTGATGAGCAATTTCCTTGACTTCAGTATGGATAGATCTGGACATGTGAGA
CATGATTACCAAATGGGCGAAGGCACGACCGTAGAACGAATAATACCGGACTCCAAATGT
GTGCAAATTCGCGCACGAGTTGCGTTACCAAAATTCCAGTGCGAAAATCCGAATTTTCCT
CGCAACCCGAACAGACAAGCTAAATGTGACAAAATGATGAAAATGAAAACTTCTTGTGAT
AACATGGATAGATTAAAGAATCAAGTACAGCAAGGCTGTGACAAATAAAGATATTTGTGT
TTCCTGCTTTTTATACGGTGCTATTATACACTGCTTTTAGTTTGTTAATACAAAAAGCGC
AGCAT
| Pfam |
A2M_N (IPR002890) - T[191-278] 4.8E-16 |
| Gene3D |
Ig-like_fold (IPR013783) - T[422-521] 7.2E-8 - T[994-1101] 2.6E-134 - T[1674-1681] 2.6E-134 |
| SMART |
A2M_N_2 (IPR011625) - T[525-660] 5.1E-30 |
| Pfam |
A2M_N_2 (IPR011625) - T[527-660] 4.2E-20 |
| SMART |
Macroglobln_a2 (IPR001599) - T[938-1030] 1.3E-17 |
| Pfam |
Macroglobln_a2 (IPR001599) - T[941-1021] 8.4E-16 |
| SUPERFAMILY |
Terpenoid_cyclase/PrenylTrfase (IPR008930) - T[1165-1486] 1.67E-66 |
| Pfam |
MacrogloblnA2_thiol-ester-bond (IPR019565) - T[1166-1191] 3.0E-9 |
| ProSitePatterns |
MacrogloblnA2_CS (IPR019742) - T[1173-1181] . |
| Pfam |
A2M_comp (IPR011626) - T[1217-1483] 1.8E-74 |
| Gene3D |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[1568-1673] 2.6E-134 - T[1682-1708] 2.6E-134 |
| SUPERFAMILY |
A-macroglobulin_rcpt-bd_sf (IPR036595) - T[1570-1702] 8.11E-29 |
| SMART |
A-macroglobulin_rcpt-bd (IPR009048) - T[1608-1699] 3.0E-32 |
| Pfam |
A-macroglobulin_rcpt-bd (IPR009048) - T[1610-1699] 7.5E-23 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[1725-1899] 3.14E-7 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[1756-1905] 9.177 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[1767-1834] 7.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CD109_HUMAN | 26.103 % | 200 | 2.01E-51 |
| CO3_HUMAN | 25.077 % | 232 | 4.26E-61 |
| CO5_HUMAN | 25.566 % | 199 | 3.7E-51 |