- Transcript 'KH2012:KH.C4.479.v1....' >
- Transcript 'KH2012:KH.C1.382.v1....' >
- Transcript 'KH2012:KH.C1.567.v2....' >
- Transcript 'KH2012:KH.C4.798.v1....' >
- Transcript 'KH2012:KH.C11.197.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.197.v1.A.nonSL2-1
Possible name(s)
EXO1; FEN1; GEN1
Gene model
Location
KhC11 [360,038 / 362,736]
Amino acid sequence
Length: 752
>KH.C11.197.v1.A.nonSL2-1
AICWIVLMGIQGLLKFIKDATEDIHIREYANQTVAVDTYCWLHRGSFACAEKLAKKEKTD
QYVKYCMKYLDMLQVHKVKPILVFDGCRLPSKELVEQQRHKRRKENLEKGKQYLREGKLS
QARDCFTKCISVTPAMALDVMQAARSRGIDCIVAPYEADAQLAFLSKKGIAQAIITEDSD
LLCFGCNNVVFKMDVLGRGQQVKMEHLGRVKNLVGFTPELFRHMCILSGCDYLPSIKGVG
LVKACKALKLSKSKDAYQVARKLNQYIKSVGPIDPSYGADFERADKTFLYQLVFDPSKRE
LIPLNEYPPGVTVDDLNFAGAMFNKAEAFQLAIGNVDVNTKLRIGFFDVDEWISSRKSTS
PSIWSSKNNSHKAVSNADTVFIEQVSEKPTKQMNKPQKEEGLVLTAEDILEGVLKNEPDT
EDFKEKKVKLKPKMEPSISLRSQIENDLINSYKPTKRNKKNIGLRRSPRKIGQIVKSRFF
VPTSSSPKMKFAEVKSESENVLNGDEMFTDQETEGFSMADVTPDKVLDDILSEMSSEVGK
PVDLPISPESSGLNPFSKNLNSSLKRNRSSLNSSDEGLRVFTGKKRKKIIIPNIEASPGL
NEEVASLEISSGDVERTTDSINEGIPILDDKIKLTDKVNIKEETTDHQSEDLESIPILDI
PRAPLSLLEDGNGSSAANKDKQVVCLSCNTDEEAFVQKVPVRKTLGIRRSVVEPKNKTVS
KYFGSQKKVGLKKTNPKKSKSQKSITNFFNKS
Nucleotide sequence
Length: 2,481
>KH2012:KH.C11.197.v1.A.nonSL2-1
ATGTTGTATACGAAACGTAAGCTATATGTTGGATCGTTTTAATGGGAATTCAAGGCCTTT
TAAAGTTTATAAAAGATGCCACGGAAGATATACACATTCGGGAATATGCAAACCAAACGG
TTGCGGTCGATACTTACTGTTGGTTGCATAGAGGATCGTTTGCGTGCGCAGAAAAACTCG
CGAAAAAAGAAAAGACGGATCAGTACGTAAAGTACTGCATGAAGTACCTGGATATGCTCC
AAGTACATAAGGTAAAACCAATCTTAGTTTTCGATGGTTGTCGACTGCCTTCTAAAGAAC
TTGTTGAGCAGCAAAGACATAAACGCAGAAAAGAGAATCTCGAAAAAGGCAAACAATATT
TGAGAGAAGGTAAACTTTCCCAGGCTAGAGATTGTTTTACTAAATGTATCAGTGTGACAC
CTGCCATGGCACTTGATGTTATGCAGGCGGCACGGAGCCGTGGCATCGATTGTATCGTGG
CACCATATGAAGCTGACGCACAACTTGCATTTTTATCCAAGAAAGGAATTGCTCAAGCAA
TTATCACCGAGGACTCGGATTTGTTGTGCTTTGGTTGTAACAACGTTGTTTTTAAAATGG
ATGTGTTGGGAAGAGGTCAACAAGTGAAGATGGAACATTTGGGAAGAGTGAAGAATCTGG
TCGGATTTACACCCGAGTTGTTCCGACATATGTGTATATTGTCAGGCTGTGATTATTTAC
CAAGCATTAAGGGTGTTGGGCTTGTTAAAGCTTGCAAAGCACTCAAGTTATCAAAAAGCA
AAGATGCATACCAAGTAGCAAGGAAATTGAACCAGTACATTAAAAGTGTTGGACCAATTG
ATCCATCGTATGGGGCTGATTTTGAGCGTGCGGATAAGACATTTTTATACCAACTTGTGT
TTGACCCTAGTAAGCGTGAACTTATACCTTTGAATGAATACCCACCTGGTGTGACTGTGG
ATGATCTAAACTTTGCAGGTGCCATGTTTAATAAAGCAGAAGCATTTCAACTTGCTATCG
GTAATGTGGATGTAAATACAAAACTTCGAATTGGTTTCTTTGATGTTGATGAATGGATAT
CTAGTCGGAAATCTACTTCCCCAAGTATTTGGAGCAGTAAAAATAACTCCCACAAGGCAG
TGAGCAATGCAGACACTGTATTTATTGAACAAGTTTCAGAGAAACCAACAAAACAGATGA
ACAAGCCACAAAAAGAAGAGGGACTTGTTCTTACTGCAGAAGATATTTTGGAAGGGGTTT
TAAAAAATGAGCCGGACACAGAAGATTTTAAAGAGAAGAAGGTAAAGTTAAAACCCAAGA
TGGAACCAAGTATTAGTCTGAGAAGTCAAATTGAAAATGACCTGATTAATAGTTACAAGC
CAACAAAACGAAATAAAAAAAATATTGGTTTGAGAAGAAGTCCAAGAAAAATTGGACAAA
TTGTAAAAAGTCGTTTTTTTGTCCCAACTTCCTCCTCACCCAAGATGAAATTTGCGGAAG
TAAAATCTGAAAGTGAAAACGTGTTGAACGGTGATGAGATGTTCACTGACCAAGAAACTG
AAGGTTTCTCTATGGCTGATGTAACCCCAGATAAAGTATTGGATGATATTTTATCTGAAA
TGTCAAGTGAGGTTGGGAAACCAGTGGATCTTCCCATTTCTCCTGAGAGTAGTGGGTTAA
ATCCTTTTAGTAAAAATTTGAATTCCAGTTTAAAACGGAATAGATCTTCACTAAATAGCA
GCGATGAAGGATTAAGAGTGTTTACGGGGAAAAAACGTAAAAAAATTATAATTCCCAATA
TTGAGGCCAGTCCTGGTTTAAATGAAGAAGTTGCAAGTTTAGAGATAAGTTCTGGTGATG
TAGAGAGAACTACTGATTCAATTAACGAAGGAATTCCTATATTAGATGATAAAATCAAAC
TCACAGATAAAGTAAATATAAAAGAAGAAACCACTGATCATCAAAGTGAAGATTTAGAAT
CCATACCTATCCTAGATATACCTCGTGCACCGTTATCATTGTTAGAAGATGGTAACGGTA
GTTCTGCTGCAAACAAAGATAAACAAGTTGTGTGTTTATCGTGTAATACTGATGAGGAAG
CTTTTGTTCAAAAAGTTCCTGTCAGAAAAACTTTGGGAATTCGCAGAAGTGTTGTTGAAC
CAAAAAATAAAACTGTTTCTAAATATTTTGGTTCTCAAAAAAAAGTGGGTTTAAAAAAAA
CTAATCCTAAAAAATCGAAATCTCAGAAAAGTATTACAAACTTTTTTAATAAATCGTAAT
AGTTTTACTCTTTATGACTTTTTACAACGTTTTAATAGAAACAATATTTTATAATTTTTC
TTTTTCATGGTAAAACGGTTTAAACCTTAACATTGTTACTGCTCTACTGTTTGGTGCTTT
GAGATGTGCATAATACCTGCCAAGTTTTAATGGTTTCATGACATACTTTCCTACTTTGAA
TAAAAAAAACTCGCTTTGTAA
| Pfam |
XPG_DNA_repair_N (IPR006085) - T[8-105] 6.4E-22 |
| SMART |
XPG_DNA_repair_N (IPR006085) - T[8-106] 3.0E-36 |
| PANTHER |
Exo1 (IPR032641) - T[8-533] 2.6E-146 |
| PANTHER |
XPG/Rad2 (IPR006084) - T[8-533] 2.6E-146 |
| SUPERFAMILY |
PIN-like_dom_sf (IPR029060) - T[9-231] 2.5E-63 |
| PRINTS |
XPG/Rad2 (IPR006084) - T[31-45] 2.6E-30 - T[80-99] 2.6E-30 - T[144-161] 2.6E-30 - T[165-185] 2.6E-30 - T[221-236] 2.6E-30 |
| ProSitePatterns |
XPG_CS (IPR019974) - T[78-92] . - T[148-162] . |
| SMART |
XPG-I_dom (IPR006086) - T[145-216] 1.4E-23 |
| Pfam |
XPG-I_dom (IPR006086) - T[146-231] 5.9E-23 |
| SUPERFAMILY |
5-3_exonuclease_C_sf (IPR036279) - T[216-345] 9.27E-20 |
| SMART |
HhH2 (IPR008918) - T[218-251] 1.2E-7 |
| CDD |
EXO1_H3TH (IPR037315) - T[219-295] 5.15491E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FEN1_HUMAN | 28.803 % | 88.2 | 1.46E-18 |
| EXO1_HUMAN | 46.169 % | 419 | 8.28E-135 |