- Transcript 'KH2012:KH.C11.210.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.210.v2.A.SL1-1
Possible name(s)
ACTN2; ACTN4
Gene model
Location
KhC11 [4,007,051 / 4,023,014]
Amino acid sequence
Length: 905
>KH.C11.210.v2.A.SL1-1
GPGIRLVKLGGLTRKLVMDEQQYMQQEEGWDREGLLDPAWERQQRKTFTAWCNSHLRKAG
TQIEHIEEDFRNGLKLMLLLEVISGEQLPKPDRGKMRFHKIANVNKALEFIASKGVRLVS
IGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEESSAKEGLLLWCQRKTAPYKNVNVQNF
HMSWKDGLAFCALIHRHRPDLIDYDKLRKDDPLTNLQTAFEVAEKHLDIPQMLDAQDIFE
MAKPDERSIMTYVAAFYHAFSGNDKAETAANRILKVLGLNQENERLMDEYERLASDLLEW
IERMKPWLEDRTTDNTMEGVQRKLDDFRDYRVKQKPPKTEEKGHLEAAYNTLQTKLRLSN
RPAFMPSEGKLVQDIANAWKGLEGAEKGYEEWLLAEMRRLERLDHLAKKFYHKAGIHQKW
SRGQEEALASEDYKVCTFQEVKALMKKHEAFESDLAAHQDRVEQIAAIGQELNDLDYHDA
RTINDSCAAICNEWDRLGDATQKRRTALENIEQILDSIEQQHLEFAKRAAPFNNWLDGAK
EDLEDMFIVHSIDEIKGLIEAHVSFKDTLPQAQKEEESISALVQNIKKIQRQYGLPEQVC
VNTYSTISEEELREKWRTVCDMVPVRDASLQTELSKQKRHELLRNEFAQIANELYPWITK
ITKDTNRISMEMVGSLEEVKNSLVEFQQKMVAQVPKLEALEKKHQEMQDELVFDNILTPH
TMEAIHTAWEHLKTTIALTINEVENQILMRDAKGLTQEQMNEFRSSFNHFDRDQNGTLHP
ENFRGCLIMAGLDVTPDTVQGEAEFQRIMALVDPSGTNNVTFQSFIDFMTRESTDSDTAE
QVVESFRILAGDKPYITAQELRNELPPDQAEYCISRMSRYSAGDAPGDALDYESFSTALY
GESDL
Nucleotide sequence
Length: 3,236
>KH2012:KH.C11.210.v2.A.SL1-1
GGACCTGGTATTAGGTTGGTAAAATTAGGTGGCTTGACAAGGAAACTAGTAATGGATGAA
CAGCAGTATATGCAACAGGAGGAAGGATGGGACAGAGAAGGACTCCTCGACCCAGCGTGG
GAGAGACAGCAACGGAAGACCTTCACAGCCTGGTGCAACTCCCACCTTAGGAAGGCTGGC
ACACAGATTGAGCATATCGAGGAGGATTTTCGTAACGGACTGAAACTCATGTTGTTATTG
GAGGTGATATCCGGGGAACAACTGCCAAAACCTGACCGTGGTAAAATGAGGTTCCACAAG
ATTGCCAACGTTAACAAAGCTCTGGAGTTTATTGCAAGCAAAGGAGTTCGCTTGGTGTCT
ATTGGTGCAGAAGAAATCGTGGACGGGAATGCAAAGATGACACTGGGTATGATCTGGACC
ATTATCCTCAGATTCGCTATCCAAGATATCTCAGTGGAAGAATCTTCTGCCAAAGAAGGA
TTATTGTTGTGGTGTCAACGTAAAACTGCCCCATACAAGAATGTTAACGTGCAGAACTTC
CATATGAGCTGGAAAGATGGTTTGGCTTTCTGTGCCCTTATTCACAGGCATAGACCAGAT
CTTATCGACTATGATAAACTACGAAAGGACGACCCATTGACCAATCTGCAAACAGCGTTT
GAAGTCGCAGAGAAACATCTTGACATCCCACAGATGTTGGACGCTCAAGACATTTTCGAA
ATGGCGAAACCAGATGAGCGTTCTATCATGACTTACGTTGCCGCATTCTATCATGCGTTC
TCTGGCAACGATAAGGCCGAAACTGCAGCAAACAGGATCTTGAAGGTTCTTGGTTTGAAC
CAGGAGAATGAAAGATTGATGGATGAGTATGAGAGACTTGCATCTGATTTGCTGGAGTGG
ATTGAAAGAATGAAGCCGTGGCTTGAAGACCGTACCACGGACAACACCATGGAAGGCGTG
CAAAGAAAACTTGACGACTTCAGAGATTACAGAGTGAAGCAGAAACCACCAAAGACTGAA
GAGAAAGGTCATTTGGAGGCAGCATACAACACTCTGCAGACGAAGCTTCGTCTCAGCAAT
CGACCAGCGTTCATGCCATCGGAGGGCAAGTTGGTACAAGATATCGCGAATGCATGGAAA
GGATTGGAAGGAGCAGAGAAAGGATATGAAGAGTGGCTGCTTGCTGAGATGAGAAGGTTA
GAGCGACTTGACCATCTTGCCAAGAAGTTTTACCACAAAGCTGGAATTCATCAGAAGTGG
TCTCGTGGTCAGGAAGAAGCTCTCGCATCAGAGGATTATAAAGTTTGCACCTTCCAAGAA
GTCAAGGCTTTGATGAAAAAACATGAAGCGTTTGAAAGTGATTTGGCTGCCCATCAAGAC
AGAGTTGAACAAATTGCTGCTATTGGTCAAGAACTCAATGATCTTGACTACCACGATGCT
CGTACCATCAATGATAGTTGTGCAGCCATCTGTAATGAATGGGATCGACTTGGTGATGCA
ACTCAAAAGCGAAGAACTGCTCTTGAGAACATCGAGCAAATCTTGGATTCCATTGAGCAG
CAACATCTGGAGTTTGCCAAAAGAGCCGCTCCCTTCAACAACTGGTTGGATGGAGCAAAG
GAAGACTTGGAAGATATGTTTATCGTGCATTCTATTGACGAGATTAAGGGCTTGATTGAA
GCTCATGTCTCGTTCAAAGACACGCTTCCACAAGCACAGAAGGAAGAGGAAAGCATCAGC
GCTCTTGTACAGAACATTAAGAAGATACAGCGACAATATGGCTTGCCTGAACAAGTCTGT
GTCAACACGTACTCAACTATTTCCGAAGAGGAACTTCGAGAAAAGTGGAGGACAGTGTGT
GACATGGTCCCTGTGCGTGACGCTTCACTACAAACTGAACTAAGCAAACAGAAACGCCAC
GAACTGCTAAGAAACGAATTCGCTCAGATCGCCAACGAACTTTATCCATGGATTACTAAG
ATCACAAAGGACACCAACCGTATCTCAATGGAAATGGTTGGCTCACTGGAAGAAGTAAAG
AATAGTCTCGTTGAGTTCCAACAGAAGATGGTCGCTCAAGTTCCTAAACTTGAAGCTTTG
GAGAAGAAACACCAGGAAATGCAAGACGAGTTAGTGTTTGATAACATATTAACCCCACAT
ACCATGGAAGCGATCCACACAGCGTGGGAACATCTTAAAACAACAATCGCGCTCACAATT
AACGAGGTTGAGAACCAAATCCTCATGCGCGATGCCAAGGGATTGACACAAGAACAAATG
AACGAGTTCCGATCTTCATTCAACCATTTCGACCGGGACCAAAACGGCACGCTACACCCC
GAAAATTTCCGTGGCTGCCTTATTATGGCAGGCCTTGATGTGACACCGGACACGGTGCAG
GGTGAAGCCGAGTTCCAACGTATCATGGCACTTGTTGATCCAAGTGGAACAAACAACGTT
ACTTTCCAAAGTTTCATTGACTTCATGACCCGTGAAAGCACGGATTCTGACACGGCCGAA
CAAGTTGTCGAATCTTTCCGTATTCTCGCCGGTGACAAGCCTTACATCACTGCCCAAGAG
TTGAGAAACGAGTTGCCACCCGATCAGGCCGAGTATTGCATCAGTCGTATGTCTCGTTAC
AGCGCAGGGGATGCACCAGGCGATGCACTCGACTACGAAAGCTTCTCTACCGCCCTCTAT
GGGGAGTCTGATCTTTAAACCGCGCAAGCGATATTTTATTTCTATATCAATGGACACAAC
AGCAAACAATTATGTTTTGCTGCCCCCCCACATAATGAAATCAGATTTTTATTAGCAGTA
TATATAATCAGTTTAGTTTGTGTACTATACTCTAATTCTTGTGAACTTCCAAAGCCTGAA
ATAATCGGCCGCGTAATGACGTAATCAAATAAATAATCTGCCATCCAGTTTTAGCCACGT
ATGTGCTAGTGGTATTAACATGATGCCACAAAGTAGTGTTAACGCTCGCGATCGCTTCAA
TGGCAGCCAATATAATTTACAACTCATGCTCTTGCTTACATGGCTGCAATAATTAACCAC
AAACGCACCGACCTGCCCCATTACTCCGCTCGTTTCTGGGTGACTTTTACTTTAAATACA
ACTCCAATACTTTTTTCACCAAACATCCTTTTTTCAATTTGACCTTTACTAAAAATAGAG
TGCTTTTTAATGGACGAATTTATTACAAGTTGTCCAACTAATGCCTTCCTTTCACC
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[28-260] 9.75E-86 |
| Gene3D |
CH_dom_sf (IPR036872) - T[31-152] 8.1E-44 - T[153-270] 6.9E-52 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[42-146] 17.204 - T[155-258] 17.247 |
| Pfam |
CH-domain (IPR001715) - T[43-146] 2.4E-23 - T[156-261] 5.3E-28 |
| CDD |
CH-domain (IPR001715) - T[44-146] 4.49664E-22 - T[156-260] 1.73837E-27 |
| SMART |
CH-domain (IPR001715) - T[44-144] 2.5E-23 - T[157-256] 7.3E-26 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[44-53] . - T[118-142] . |
| Pfam |
Spectrin_repeat (IPR002017) - T[286-394] 1.1E-11 - T[406-510] 7.2E-22 - T[521-631] 2.0E-11 - T[644-744] 3.7E-8 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[288-394] 1.1 - T[408-509] 2.3E-21 - T[523-631] 3.3E-4 - T[645-744] 4.2 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[744-896] 1.9E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[758-793] 12.031 - T[800-835] 8.99 |
| SMART |
EF_hand_dom (IPR002048) - T[762-790] 0.75 - T[804-832] 0.98 |
| CDD |
EF_hand_dom (IPR002048) - T[762-830] 4.01445E-9 |
| Pfam |
EF-hand_Ca_insen (IPR014837) - T[835-901] 1.7E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTN2_HUMAN | 67.634 % | 1259 | 0 |
| ACTN1_HUMAN | 66.966 % | 1230 | 0 |
| ACTN4_HUMAN | 66.931 % | 1208 | 0 |