- Transcript 'KH2012:KH.C11.22.v2....'
Transcript Model
Transcript Id
KH2012:KH.C11.22.v2.A.nonSL34-1
Possible name(s)
ACTA1; ACTC1; ACTR2
Gene model
Location
KhC11 [5,136,980 / 5,139,869]
Amino acid sequence
Length: 263
>KH.C11.22.v2.A.nonSL34-1
PHIVLQVASVGICLTMDNQGRRVVVCDNGTGFVKCGFAGSNFPAHIFPALVGRPILRSTA
KDGEVEIKDLMVGDEASQLRSQLEVNYPIENGIVRNWEDMEHLWDYTFGPEKLNIDPSNS
KVLLTEPPMNPAKNREKIIQRMFEKYGFDSCYIAVQAVLTLYAQGLLTGIVVDIGDGVSH
ICPVYEGFALPHLTRRLDVAGRDITRYLIKLMLLRGYVFNQSADFETVRMMKEKLCYIXF
WLTKQEYEEKGLRVLENLGVKVG
Nucleotide sequence
Length: 1,173
>KH2012:KH.C11.22.v2.A.nonSL34-1
ATATAACGAATAACCACACATTGTGTTGCAGGTAGCTAGTGTTGGTATTTGTTTGACGAT
GGATAATCAAGGAAGGAGAGTGGTAGTGTGCGATAATGGGACTGGGTTTGTAAAATGCGG
GTTCGCTGGTTCAAACTTCCCTGCCCATATTTTCCCAGCGTTGGTTGGACGTCCAATCCT
CAGGTCAACAGCAAAAGATGGAGAAGTCGAAATTAAGGACCTGATGGTCGGTGACGAAGC
GAGTCAACTACGATCGCAACTCGAGGTGAATTACCCGATCGAGAACGGGATTGTACGGAA
CTGGGAGGACATGGAGCATTTGTGGGATTATACGTTTGGACCAGAGAAGCTCAACATTGA
TCCGAGTAACTCTAAAGTTCTTCTAACCGAACCCCCAATGAACCCCGCCAAGAACAGAGA
GAAAATTATCCAGAGAATGTTTGAGAAATATGGCTTCGACAGTTGTTACATCGCTGTGCA
AGCCGTGCTAACTTTGTATGCACAAGGTTTACTCACTGGCATAGTAGTCGACATTGGTGA
TGGCGTGTCCCATATTTGTCCTGTGTACGAGGGGTTTGCGCTTCCCCATCTAACAAGGAG
GTTGGATGTTGCTGGGAGGGATATCACTCGATATCTTATTAAGTTAATGCTTCTCCGAGG
TTACGTCTTCAACCAATCCGCCGACTTTGAAACCGTTCGAATGATGAAAGAAAAACTTTG
TTATATCGCNTTCTGGTTGACGAAGCAAGAATACGAAGAGAAAGGTCTCCGTGTGTTGGA
GAATTTGGGGGTGAAAGTTGGTTAACTTACCAACTGTGTATATCAACATAGAAACATCAT
AATAGTTGATATATATGCAGTATTTATATTGGGGACCAATCAATGATTTTAAAACTATGA
CGTCAATTCTGATCGTGACGTAAATTGTGATGCAATTGTTTGTAAATATTCAATCTATAT
ATACTCTAGTGACGTCATCTATCTTGTGACGTCATGTATCCACAGTAATCGCCTTAATAT
GACGTCATTATACCGGCTGCTTTTAATCATGGTTCGTTCCGATCTGTTACGTCACAATGC
CCCGTGACAATGTATATTATTACGTATAGAATTGCACTCGAATATTTGTGTAAGACAAAC
CAAGAAACGACAATAACATATTCCAGAATGGTG
| PANTHER |
Arp2 (IPR027306) - T[16-239] 1.6E-138 - T[240-259] 1.6E-138 |
| PANTHER |
Actin (IPR004000) - T[16-239] 1.6E-138 - T[240-259] 1.6E-138 |
| Pfam |
Actin (IPR004000) - T[21-238] 1.6E-64 |
| SMART |
Actin (IPR004000) - T[21-259] 5.5E-62 |
| PRINTS |
Actin (IPR004000) - T[42-51] 2.1E-23 - T[67-78] 2.1E-23 - T[79-101] 2.1E-23 - T[134-147] 2.1E-23 - T[159-178] 2.1E-23 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[123-135] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTS_HUMAN | 51.339 % | 235 | 5.2E-76 |
| ACTC_HUMAN | 51.339 % | 236 | 1.32E-76 |
| ARP2_HUMAN | 79.654 % | 407 | 2.3E-143 |