- Transcript 'KH2012:KH.C11.22.v2....'
Transcript Model
Transcript Id
KH2012:KH.C11.22.v2.A.nonSL36-1
Possible name(s)
ACTA1; ACTC1; ACTR2
Gene model
Location
KhC11 [5,136,980 / 5,139,862]
Amino acid sequence
Length: 263
>KH.C11.22.v2.A.nonSL36-1
PHIVLQVASVGICLTMDNQGRRVVVCDNGTGFVKCGFAGSNFPAHIFPALVGRPILRSTA
KDGEVEIKDLMVGDEASQLRSQLEVNYPIENGIVRNWEDMEHLWDYTFGPEKLNIDPSNS
KVLLTEPPMNPAKNREKIIQRMFEKYGFDSCYIAVQAVLTLYAQGLLTGIVVDIGDGVSH
ICPVYEGFALPHLTRRLDVAGRDITRYLIKLMLLRGYVFNQSADFETVRMMKEKLCYIXF
WLTKQEYEEKGLRVLENLGVKVG
Nucleotide sequence
Length: 1,166
>KH2012:KH.C11.22.v2.A.nonSL36-1
GAATAACCACACATTGTGTTGCAGGTAGCTAGTGTTGGTATTTGTTTGACGATGGATAAT
CAAGGAAGGAGAGTGGTAGTGTGCGATAATGGGACTGGGTTTGTAAAATGCGGGTTCGCT
GGTTCAAACTTCCCTGCCCATATTTTCCCAGCGTTGGTTGGACGTCCAATCCTCAGGTCA
ACAGCAAAAGATGGAGAAGTCGAAATTAAGGACCTGATGGTCGGTGACGAAGCGAGTCAA
CTACGATCGCAACTCGAGGTGAATTACCCGATCGAGAACGGGATTGTACGGAACTGGGAG
GACATGGAGCATTTGTGGGATTATACGTTTGGACCAGAGAAGCTCAACATTGATCCGAGT
AACTCTAAAGTTCTTCTAACCGAACCCCCAATGAACCCCGCCAAGAACAGAGAGAAAATT
ATCCAGAGAATGTTTGAGAAATATGGCTTCGACAGTTGTTACATCGCTGTGCAAGCCGTG
CTAACTTTGTATGCACAAGGTTTACTCACTGGCATAGTAGTCGACATTGGTGATGGCGTG
TCCCATATTTGTCCTGTGTACGAGGGGTTTGCGCTTCCCCATCTAACAAGGAGGTTGGAT
GTTGCTGGGAGGGATATCACTCGATATCTTATTAAGTTAATGCTTCTCCGAGGTTACGTC
TTCAACCAATCCGCCGACTTTGAAACCGTTCGAATGATGAAAGAAAAACTTTGTTATATC
GCNTTCTGGTTGACGAAGCAAGAATACGAAGAGAAAGGTCTCCGTGTGTTGGAGAATTTG
GGGGTGAAAGTTGGTTAACTTACCAACTGTGTATATCAACATAGAAACATCATAATAGTT
GATATATATGCAGTATTTATATTGGGGACCAATCAATGATTTTAAAACTATGACGTCAAT
TCTGATCGTGACGTAAATTGTGATGCAATTGTTTGTAAATATTCAATCTATATATACTCT
AGTGACGTCATCTATCTTGTGACGTCATGTATCCACAGTAATCGCCTTAATATGACGTCA
TTATACCGGCTGCTTTTAATCATGGTTCGTTCCGATCTGTTACGTCACAATGCCCCGTGA
CAATGTATATTATTACGTATAGAATTGCACTCGAATATTTGTGTAAGACAAACCAAGAAA
CGACAATAACATATTCCAGAATGGTG
| PANTHER |
Arp2 (IPR027306) - T[16-239] 1.6E-138 - T[240-259] 1.6E-138 |
| PANTHER |
Actin (IPR004000) - T[16-239] 1.6E-138 - T[240-259] 1.6E-138 |
| Pfam |
Actin (IPR004000) - T[21-238] 1.6E-64 |
| SMART |
Actin (IPR004000) - T[21-259] 5.5E-62 |
| PRINTS |
Actin (IPR004000) - T[42-51] 2.1E-23 - T[67-78] 2.1E-23 - T[79-101] 2.1E-23 - T[134-147] 2.1E-23 - T[159-178] 2.1E-23 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[123-135] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTS_HUMAN | 51.339 % | 235 | 5.2E-76 |
| ACTC_HUMAN | 51.339 % | 236 | 1.32E-76 |
| ARP2_HUMAN | 79.654 % | 407 | 2.3E-143 |