- Transcript 'KH2012:KH.C11.22.v3....' >
- Transcript 'KH2012:KH.C11.22.v3....' >
- Transcript 'KH2012:KH.C11.22.v2....'
Transcript Model
Transcript Id
KH2012:KH.C11.22.v2.A.nonSL5-1
Possible name(s)
ACTA1; ACTC1; ACTR2
Gene model
Location
KhC11 [5,136,980 / 5,139,854]
Amino acid sequence
Length: 262
>KH.C11.22.v2.A.nonSL5-1
HIVLQVASVGICLTMDNQGRRVVVCDNGTGFVKCGFAGSNFPAHIFPALVGRPILRSTAK
DGEVEIKDLMVGDEASQLRSQLEVNYPIENGIVRNWEDMEHLWDYTFGPEKLNIDPSNSK
VLLTEPPMNPAKNREKIIQRMFEKYGFDSCYIAVQAVLTLYAQGLLTGIVVDIGDGVSHI
CPVYEGFALPHLTRRLDVAGRDITRYLIKLMLLRGYVFNQSADFETVRMMKEKLCYIXFW
LTKQEYEEKGLRVLENLGVKVG
Nucleotide sequence
Length: 1,158
>KH2012:KH.C11.22.v2.A.nonSL5-1
ACACATTGTGTTGCAGGTAGCTAGTGTTGGTATTTGTTTGACGATGGATAATCAAGGAAG
GAGAGTGGTAGTGTGCGATAATGGGACTGGGTTTGTAAAATGCGGGTTCGCTGGTTCAAA
CTTCCCTGCCCATATTTTCCCAGCGTTGGTTGGACGTCCAATCCTCAGGTCAACAGCAAA
AGATGGAGAAGTCGAAATTAAGGACCTGATGGTCGGTGACGAAGCGAGTCAACTACGATC
GCAACTCGAGGTGAATTACCCGATCGAGAACGGGATTGTACGGAACTGGGAGGACATGGA
GCATTTGTGGGATTATACGTTTGGACCAGAGAAGCTCAACATTGATCCGAGTAACTCTAA
AGTTCTTCTAACCGAACCCCCAATGAACCCCGCCAAGAACAGAGAGAAAATTATCCAGAG
AATGTTTGAGAAATATGGCTTCGACAGTTGTTACATCGCTGTGCAAGCCGTGCTAACTTT
GTATGCACAAGGTTTACTCACTGGCATAGTAGTCGACATTGGTGATGGCGTGTCCCATAT
TTGTCCTGTGTACGAGGGGTTTGCGCTTCCCCATCTAACAAGGAGGTTGGATGTTGCTGG
GAGGGATATCACTCGATATCTTATTAAGTTAATGCTTCTCCGAGGTTACGTCTTCAACCA
ATCCGCCGACTTTGAAACCGTTCGAATGATGAAAGAAAAACTTTGTTATATCGCNTTCTG
GTTGACGAAGCAAGAATACGAAGAGAAAGGTCTCCGTGTGTTGGAGAATTTGGGGGTGAA
AGTTGGTTAACTTACCAACTGTGTATATCAACATAGAAACATCATAATAGTTGATATATA
TGCAGTATTTATATTGGGGACCAATCAATGATTTTAAAACTATGACGTCAATTCTGATCG
TGACGTAAATTGTGATGCAATTGTTTGTAAATATTCAATCTATATATACTCTAGTGACGT
CATCTATCTTGTGACGTCATGTATCCACAGTAATCGCCTTAATATGACGTCATTATACCG
GCTGCTTTTAATCATGGTTCGTTCCGATCTGTTACGTCACAATGCCCCGTGACAATGTAT
ATTATTACGTATAGAATTGCACTCGAATATTTGTGTAAGACAAACCAAGAAACGACAATA
ACATATTCCAGAATGGTG
| PANTHER |
Arp2 (IPR027306) - T[15-238] 1.6E-138 - T[239-258] 1.6E-138 |
| PANTHER |
Actin (IPR004000) - T[15-238] 1.6E-138 - T[239-258] 1.6E-138 |
| Pfam |
Actin (IPR004000) - T[20-237] 1.6E-64 |
| SMART |
Actin (IPR004000) - T[20-258] 5.5E-62 |
| PRINTS |
Actin (IPR004000) - T[41-50] 2.0E-23 - T[66-77] 2.0E-23 - T[78-100] 2.0E-23 - T[133-146] 2.0E-23 - T[158-177] 2.0E-23 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[122-134] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTS_HUMAN | 51.339 % | 235 | 4.46E-76 |
| ACTC_HUMAN | 51.339 % | 236 | 1.12E-76 |
| ARP2_HUMAN | 79.654 % | 407 | 1.69E-143 |