- Transcript 'KH2012:KH.C11.22.v2....' >
- Transcript 'KH2012:KH.C11.22.v3....' >
- Transcript 'KH2012:KH.C11.22.v3....'
Transcript Model
Transcript Id
KH2012:KH.C11.22.v3.A.nonSL26-1
Possible name(s)
ACTA1; ACTC1; ACTR2
Gene model
Location
KhC11 [5,136,980 / 5,140,043]
Amino acid sequence
Length: 257
>KH.C11.22.v3.A.nonSL26-1
VASVGICLTMDNQGRRVVVCDNGTGFVKCGFAGSNFPAHIFPALVGRPILRSTAKDGEVE
IKDLMVGDEASQLRSQLEVNYPIENGIVRNWEDMEHLWDYTFGPEKLNIDPSNSKVLLTE
PPMNPAKNREKIIQRMFEKYGFDSCYIAVQAVLTLYAQGLLTGIVVDIGDGVSHICPVYE
GFALPHLTRRLDVAGRDITRYLIKLMLLRGYVFNQSADFETVRMMKEKLCYIXFWLTKQE
YEEKGLRVLENLGVKVG
Nucleotide sequence
Length: 1,215
>KH2012:KH.C11.22.v3.A.nonSL26-1
ATACGTGGTTCTATAACACCTGGTAGGCAAATTATCTTTAATTTGGGAAGGTTTATCTCA
CATTTAGCCTTAGGTAGCTAGTGTTGGTATTTGTTTGACGATGGATAATCAAGGAAGGAG
AGTGGTAGTGTGCGATAATGGGACTGGGTTTGTAAAATGCGGGTTCGCTGGTTCAAACTT
CCCTGCCCATATTTTCCCAGCGTTGGTTGGACGTCCAATCCTCAGGTCAACAGCAAAAGA
TGGAGAAGTCGAAATTAAGGACCTGATGGTCGGTGACGAAGCGAGTCAACTACGATCGCA
ACTCGAGGTGAATTACCCGATCGAGAACGGGATTGTACGGAACTGGGAGGACATGGAGCA
TTTGTGGGATTATACGTTTGGACCAGAGAAGCTCAACATTGATCCGAGTAACTCTAAAGT
TCTTCTAACCGAACCCCCAATGAACCCCGCCAAGAACAGAGAGAAAATTATCCAGAGAAT
GTTTGAGAAATATGGCTTCGACAGTTGTTACATCGCTGTGCAAGCCGTGCTAACTTTGTA
TGCACAAGGTTTACTCACTGGCATAGTAGTCGACATTGGTGATGGCGTGTCCCATATTTG
TCCTGTGTACGAGGGGTTTGCGCTTCCCCATCTAACAAGGAGGTTGGATGTTGCTGGGAG
GGATATCACTCGATATCTTATTAAGTTAATGCTTCTCCGAGGTTACGTCTTCAACCAATC
CGCCGACTTTGAAACCGTTCGAATGATGAAAGAAAAACTTTGTTATATCGCNTTCTGGTT
GACGAAGCAAGAATACGAAGAGAAAGGTCTCCGTGTGTTGGAGAATTTGGGGGTGAAAGT
TGGTTAACTTACCAACTGTGTATATCAACATAGAAACATCATAATAGTTGATATATATGC
AGTATTTATATTGGGGACCAATCAATGATTTTAAAACTATGACGTCAATTCTGATCGTGA
CGTAAATTGTGATGCAATTGTTTGTAAATATTCAATCTATATATACTCTAGTGACGTCAT
CTATCTTGTGACGTCATGTATCCACAGTAATCGCCTTAATATGACGTCATTATACCGGCT
GCTTTTAATCATGGTTCGTTCCGATCTGTTACGTCACAATGCCCCGTGACAATGTATATT
ATTACGTATAGAATTGCACTCGAATATTTGTGTAAGACAAACCAAGAAACGACAATAACA
TATTCCAGAATGGTG
| PANTHER |
Arp2 (IPR027306) - T[10-233] 1.4E-138 - T[234-253] 1.4E-138 |
| PANTHER |
Actin (IPR004000) - T[10-233] 1.4E-138 - T[234-253] 1.4E-138 |
| SMART |
Actin (IPR004000) - T[15-253] 5.5E-62 |
| Pfam |
Actin (IPR004000) - T[15-232] 1.5E-64 |
| PRINTS |
Actin (IPR004000) - T[36-45] 1.9E-23 - T[61-72] 1.9E-23 - T[73-95] 1.9E-23 - T[128-141] 1.9E-23 - T[153-172] 1.9E-23 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[117-129] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTS_HUMAN | 51.339 % | 235 | 2.66E-76 |
| ACTC_HUMAN | 51.339 % | 237 | 6.05E-77 |
| ARP2_HUMAN | 79.654 % | 407 | 1.82E-143 |