- Transcript 'KH2012:KH.L112.13.v1...' >
- Transcript 'KH2012:KH.C1.1238.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1238.v1.A.SL1-1
Possible name(s)
KATNB1; POC1A; WDR33
Gene model
Location
KhC1 [141,080 / 149,679]
Amino acid sequence
Length: 854
>KH.C1.1238.v1.A.SL1-1
ESDSKLNKTTSDKMAAIFPNQNLMQPPDQRNEPNQQNQRYSRQYQPYVFQPNFLKQQMRQ
RELEKATHLGQLDATNQASMRALMQGRISGGNQMSAANLLDEANRKKSGRKVIDWTSSCT
IYLERRRWQRESEDVPSLLPDASFSIEMQSTMAYKDSSCSSVATKFVRSATNKMKCPVYK
VVWTPDGRRLVTGSASGEFTLWNGTAFNFETILQAHDSPVRAMSWSKNDAWLITGDNQGY
IKYWQLNMNNVKMYQAHKDQACRSVCFGPTDAKFATASDDGTVRIWDFLRCQEEHILKGH
GADVKQVDWHPQKGLLASASKDLHTPVKLWDPKSGQSLATVHAHKGTVMDIKWNRNGNWF
LTASRDHLVKLYDIRNLKEEVQYFRGHKKEAFSVAWHPIHEEMFASGGSEGSIMYWQVGE
DKEIGSLEGAHDSLIWSLAWHPLGHILVSGSNDHSTKFWTRNRPGDQMRDRYNLFPHNED
PAPIDRTTNKNDGGNIRITTSVIPGMGEVDAVVADVAKRDEEAQQKVGIPGLDWSFEEKN
EFDRKNLIHDHRKKIPYSRPVPRLFAAAWDSNKEVARHRSPSPPRFKDQNYYPERRFHRP
RDDRGPPDMPPDERGMEFHPRMEFQNRGEQEMLGDFPPQGIPPEQNFQRSLEENEQTEQM
YRDPELNYDMQAMGDFGDPALLKHIERRPIDENFQSENFGHPRPPQGNFRGMPHNRGNMN
NQQNHRPHGVMEYDNIVVHDDFAGYNQQQEFFVGDMQNNSFNKPIQGFEEGNEFKVEQER
NNFEQMPQHAMEPQQHIGQGFERRLDNQYNFHDAPRGRGRGRGKRFGFGDAPNRRGRGWT
QRGHRTPPRMRRGR
Nucleotide sequence
Length: 2,918
>KH2012:KH.C1.1238.v1.A.SL1-1
TCATTGTTATCAAGTGATATCATATAATAGGCATATAATATAATGTTGTGCAATTACTCC
AAGCTGTGTTGATGCAAAAGAAAACTGAGAATCAGATTCTAAACTAAACAAAACAACAAG
CGACAAAATGGCTGCCATATTTCCAAACCAAAACCTCATGCAGCCGCCTGACCAAAGAAA
TGAACCCAATCAGCAAAATCAAAGATACAGTCGACAGTACCAGCCTTATGTCTTCCAACC
AAACTTTCTGAAGCAACAAATGCGACAACGGGAGCTTGAGAAAGCTACTCACCTCGGCCA
GCTCGACGCCACCAACCAGGCCTCCATGAGAGCATTAATGCAGGGGAGAATAAGTGGGGG
AAACCAAATGTCCGCTGCCAATCTTTTGGATGAGGCGAACCGGAAAAAATCTGGCAGAAA
AGTTATAGATTGGACGTCATCTTGTACTATTTATCTTGAGCGTCGCCGATGGCAACGGGA
ATCAGAAGACGTCCCATCTTTACTCCCCGACGCTTCGTTCTCGATAGAAATGCAATCAAC
GATGGCGTATAAAGATAGTTCCTGTTCAAGTGTTGCAACCAAGTTTGTGAGGAGTGCAAC
AAACAAAATGAAGTGCCCTGTCTATAAGGTTGTTTGGACACCAGATGGCAGAAGATTGGT
CACTGGTTCAGCTAGCGGGGAATTTACTTTATGGAACGGAACGGCTTTCAACTTTGAAAC
AATTCTACAGGCACACGACAGTCCAGTTCGAGCAATGTCTTGGTCCAAGAATGACGCATG
GTTGATAACAGGGGACAACCAAGGTTATATAAAGTACTGGCAATTAAACATGAATAATGT
GAAGATGTACCAAGCACATAAAGATCAAGCTTGTCGCTCTGTGTGCTTTGGGCCAACTGA
TGCCAAGTTCGCAACAGCAAGCGATGATGGGACGGTAAGAATCTGGGATTTCTTACGCTG
CCAAGAGGAACATATACTAAAAGGGCATGGCGCTGATGTTAAACAAGTTGACTGGCATCC
ACAAAAGGGTTTGTTGGCTTCAGCAAGTAAAGACCTTCACACCCCTGTTAAACTATGGGA
TCCTAAGTCAGGACAAAGTTTGGCAACAGTCCACGCACATAAGGGAACAGTAATGGACAT
CAAATGGAACAGAAATGGCAACTGGTTTTTGACGGCTTCTCGTGATCATTTGGTTAAATT
ATACGACATCAGAAACTTGAAAGAAGAAGTTCAGTATTTTCGCGGTCACAAAAAAGAAGC
TTTTTCTGTTGCGTGGCACCCAATACATGAGGAGATGTTTGCCAGTGGTGGATCTGAAGG
AAGCATCATGTATTGGCAAGTTGGTGAGGACAAGGAGATTGGATCATTAGAAGGCGCCCA
TGATAGTTTAATATGGAGTCTTGCGTGGCACCCACTTGGTCACATACTCGTGTCAGGTTC
AAATGATCATAGCACAAAATTCTGGACCCGCAATCGACCGGGAGACCAAATGCGAGATCG
TTATAACTTGTTCCCCCACAATGAAGACCCCGCACCTATTGATAGAACAACTAATAAGAA
TGATGGCGGCAACATTAGGATCACAACATCTGTTATACCAGGCATGGGTGAGGTCGATGC
TGTCGTTGCTGACGTCGCAAAACGTGACGAGGAAGCCCAACAGAAAGTCGGGATACCCGG
TCTTGATTGGTCGTTCGAAGAAAAGAACGAATTTGATCGCAAGAACCTAATTCATGACCA
CCGAAAAAAGATCCCGTACTCGCGTCCCGTACCCCGATTATTCGCTGCCGCGTGGGATTC
GAACAAAGAAGTCGCTCGTCACCGATCTCCCTCCCCTCCAAGGTTCAAGGATCAGAATTA
TTATCCTGAGAGGAGGTTCCATCGTCCCAGGGATGACAGGGGTCCTCCGGACATGCCTCC
AGATGAGAGGGGGATGGAGTTTCATCCTCGCATGGAGTTTCAGAACAGGGGCGAGCAAGA
GATGTTGGGAGATTTTCCTCCGCAAGGAATTCCTCCCGAGCAAAATTTCCAGCGATCTTT
AGAAGAAAATGAGCAAACTGAGCAGATGTACAGAGACCCTGAGTTAAACTATGACATGCA
AGCGATGGGTGATTTCGGAGACCCTGCGTTACTAAAGCACATCGAACGTAGACCGATAGA
TGAAAACTTTCAGTCGGAAAACTTTGGCCACCCCCGCCCTCCACAGGGTAACTTCCGTGG
TATGCCACACAACAGAGGGAATATGAACAACCAGCAGAACCATAGACCTCATGGTGTAAT
GGAGTACGACAATATTGTCGTCCATGATGATTTTGCCGGATATAATCAACAACAGGAGTT
CTTTGTTGGTGATATGCAGAATAATTCGTTCAATAAACCGATACAAGGGTTTGAAGAGGG
GAATGAGTTTAAAGTGGAACAGGAACGAAATAACTTTGAACAGATGCCCCAACATGCAAT
GGAACCACAACAGCATATAGGACAGGGTTTCGAACGAAGGTTGGACAATCAATATAATTT
CCATGACGCCCCTCGGGGAAGGGGGCGTGGTAGGGGTAAACGATTCGGGTTCGGCGACGC
CCCTAATCGCAGAGGGCGGGGCTGGACTCAAAGGGGGCATCGAACCCCACCTAGAATGAG
AAGGGGAAGATAGTTTTTTCTATTTCTACAAATTAAAATCATTGCCGTTAAAAATTTGTT
ACTCGAATTACAATTCCGTGCTTCATTGTCTGTAATTCCAAGTTTCAATTCCCAACTTTT
CAAATTTCGCAGAAGTAAAACACTTTTATACATTCGAAATGTTCAAATTTGTGACCGAAA
CTACACTGCAGTTTTGTATCTTAGTCACCTGCACTGTTTTAAACTTCCAAGGCCATTAAA
ACTCAAGACAAACTGTTTATATAAAACAAGACTAAAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[155-292] 8.6E-27 - T[293-378] 9.1E-22 - T[379-479] 1.5E-19 |
| SMART |
WD40_repeat (IPR001680) - T[165-203] 0.14 - T[206-245] 1.1E-4 - T[247-287] 1.5E-7 - T[290-331] 4.7E-6 - T[334-373] 1.5E-8 - T[377-417] 1.1E-4 - T[420-460] 6.8E-7 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[171-203] 9.172 - T[213-254] 11.778 - T[264-287] 10.508 - T[341-382] 11.912 - T[384-426] 11.11 - T[428-459] 11.645 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[171-469] 51.464 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[172-462] 1.16E-71 |
| Pfam |
WD40_repeat (IPR001680) - T[211-244] 4.4E-4 - T[249-287] 4.4E-6 - T[292-322] 0.032 - T[335-373] 2.3E-5 - T[424-459] 7.1E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KTNB1_HUMAN | 28.8 % | 108 | 2.17E-24 |
| POC1A_HUMAN | 28.216 % | 104 | 8.12E-24 |
| WDR33_HUMAN | 60.042 % | 603 | 0 |