- Clone 'cicl009e11' >
- Transcript 'Boschl.CG.Botznik201...' >
- Clone 'cima856117' >
- Transcript 'KH2012:KH.C5.66.v5.R...' >
- Transcript 'KH2012:KH.C11.238.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.238.v1.A.SL1-2
Possible name(s)
REL; RELA; RELB
Gene model
Location
KhC11 [3,650,557 / 3,656,247]
Amino acid sequence
Length: 304
>KH.C11.238.v1.A.SL1-2
TRFYTVATWSNHFNMDRIPVLEIVEQPKQRGMRFRYECEGRSAGSIPGKNTNGDRKTWPS
CQVLNYSGVAIMRVSLVSKDDPPRPHPHSLVGRDCNNGVCQINVDPGNQMLGVFPNLGIQ
CVRRREVSQAIQDRLNHGVNPFGTMLDGDERSAVDVDLNIVRLCFEAFIPDARGKYTQKL
EPVVSDPIYDKKATCSSVLKICRVDKTHGSCMGNEEVFLLCDKVQKEDIQVVFYRDNWEA
LGDFSSVDVHRQVAIVFRTPPFCNENIQEKVDVQFKLRRPSDMETSKPLVFTYLPVYHAM
LLDR
Nucleotide sequence
Length: 1,710
>KH2012:KH.C11.238.v1.A.SL1-2
GTTTTTCCATAGACTTTGCGTTAAACAAAATTCTTCTACCTGTAAACCCGCTTTTACACT
GTAGCTACTTGGTCCAATCATTTCAATATGGATAGAATTCCAGTATTGGAGATTGTGGAG
CAACCTAAGCAGCGTGGAATGAGGTTTCGATACGAATGTGAAGGGAGATCTGCTGGAAGT
ATTCCTGGGAAAAATACAAATGGCGATCGAAAAACATGGCCGTCATGCCAGGTCTTGAAC
TACTCTGGTGTGGCGATCATGCGAGTTTCACTTGTGTCCAAAGACGACCCACCAAGACCC
CACCCTCACAGTTTAGTTGGGAGAGACTGTAACAACGGGGTTTGTCAGATTAACGTGGAT
CCTGGCAACCAAATGCTAGGGGTTTTCCCGAACCTTGGAATTCAGTGCGTGCGACGCAGA
GAAGTCAGTCAAGCGATACAAGATCGTTTAAACCACGGAGTGAATCCCTTCGGTACGATG
TTGGACGGAGACGAGAGATCCGCAGTTGATGTCGACCTTAATATTGTTCGTCTTTGTTTT
GAAGCTTTTATCCCGGACGCAAGGGGAAAATACACACAAAAACTGGAACCCGTTGTGTCA
GATCCAATATATGATAAAAAAGCCACTTGTTCGTCTGTGTTGAAAATATGTCGTGTCGAT
AAAACCCACGGAAGCTGTATGGGTAACGAAGAAGTGTTTCTCTTGTGCGACAAAGTACAG
AAAGAGGACATCCAAGTTGTTTTCTATCGCGATAACTGGGAAGCTTTGGGTGACTTTTCA
TCCGTGGATGTTCATAGACAGGTTGCTATTGTGTTCCGAACACCACCTTTTTGCAACGAA
AATATCCAAGAGAAAGTAGATGTACAATTTAAACTAAGAAGGCCATCAGACATGGAGACA
AGCAAGCCCCTAGTATTCACCTATCTCCCTGTATATCATGCCATGTTACTGGATAGGTAG
CATACTAACAGCCACTGATATAATGAAGAGAAAAGATCAGACCATTCTGAGAGGAGGTTG
AAAAGCACTGAGGCCGGAAGTTTCGTTTCAAAATGGATTTCTTCACCAAATTTTTCGAAC
CCTGATTTTGAACGAGTAGAACTGGTCATTGATGTTTTATTGCAAAACTTTATCTGTGTT
TTGAGGCCTACTTCATTTATACCATGTTCCATGATATAATCATAGAGTATCTATGAACTT
TGCAAGAAAATCAAAGCATATCTTTAATTGTAATTCTAATTGCCTGCTTGAAAATCTACT
GTATTTTTTAATTTATTTTTACAAATCCAATTGTCTTGCCCTATATTAGGGTTATGATTT
AAAACTGCTGTCTCCAGTTGCAATTATAAGCTCTTGCAACTGCAAAGTGTGAACTTATGT
TGTAGCAACTTGCATTCATACGTTTCAAAATATCTTTTTCACTTTGTAGCACTTTTAGTA
GGTCTATTGTTTTTTTTAAACGACTGTTTTATAAAAAAAATAATTTAAAGAAACCGTGTG
TACAATTGATTTAATGGTAAAAGCACTTGAGTTTTAAACTATTTTACATTTATGTAGAGC
GTAGACACAACTGCATTGCATTCGTTTTTATTGCAAGGTCTGGTTAGGTTATATTTAGCT
GCTATCATCAGCATATTAGGTCGGTCATAAAAGTTAAAACCGCTACTCAAGGGTTTAAAA
TTGTCGTTTAATAAACAAATAAAGAGAAAA
| Gene3D |
RHD_DNA_bind_dom_sf (IPR037059) - T[11-192] 6.7E-66 |
| PANTHER |
NFkB/Dor (IPR000451) - T[16-297] 9.5E-133 |
| ProSiteProfiles |
RHD_DNA_bind_dom (IPR011539) - T[16-195] 71.361 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[19-201] 1.06E-70 |
| Pfam |
RHD_DNA_bind_dom (IPR011539) - T[21-191] 8.3E-67 |
| PRINTS |
NFkB/Dor (IPR000451) - T[25-42] 5.5E-41 - T[180-194] 5.5E-41 - T[213-233] 5.5E-41 - T[244-262] 5.5E-41 - T[285-299] 5.5E-41 |
| ProSitePatterns |
RHD_CS (IPR030492) - T[34-40] . |
| Gene3D |
Ig-like_fold (IPR013783) - T[196-302] 2.3E-42 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[197-299] 3.97E-41 |
| SMART |
IPT_dom (IPR002909) - T[198-294] 2.0E-21 |
| CDD |
IPT_NFkappaB (IPR033926) - T[199-295] 4.60055E-49 |
| Pfam |
RHD_dimer (IPR032397) - T[200-295] 6.0E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| REL_HUMAN | 53.43 % | 308 | 6.85E-101 |
| TF65_HUMAN | 53.069 % | 303 | 1.17E-99 |
| RELB_HUMAN | 50.355 % | 281 | 7.41E-91 |