- Transcript 'KH2012:KH.C11.238.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.238.v1.A.SL3-2
Possible name(s)
REL; RELA; RELB
Gene model
Location
KhC11 [3,650,621 / 3,656,247]
Amino acid sequence
Length: 297
>KH.C11.238.v1.A.SL3-2
TWSNHFNMDRIPVLEIVEQPKQRGMRFRYECEGRSAGSIPGKNTNGDRKTWPSCQVLNYS
GVAIMRVSLVSKDDPPRPHPHSLVGRDCNNGVCQINVDPGNQMLGVFPNLGIQCVRRREV
SQAIQDRLNHGVNPFGTMLDGDERSAVDVDLNIVRLCFEAFIPDARGKYTQKLEPVVSDP
IYDKKATCSSVLKICRVDKTHGSCMGNEEVFLLCDKVQKEDIQVVFYRDNWEALGDFSSV
DVHRQVAIVFRTPPFCNENIQEKVDVQFKLRRPSDMETSKPLVFTYLPVYHAMLLDR
Nucleotide sequence
Length: 1,646
>KH2012:KH.C11.238.v1.A.SL3-2
CTACTTGGTCCAATCATTTCAATATGGATAGAATTCCAGTATTGGAGATTGTGGAGCAAC
CTAAGCAGCGTGGAATGAGGTTTCGATACGAATGTGAAGGGAGATCTGCTGGAAGTATTC
CTGGGAAAAATACAAATGGCGATCGAAAAACATGGCCGTCATGCCAGGTCTTGAACTACT
CTGGTGTGGCGATCATGCGAGTTTCACTTGTGTCCAAAGACGACCCACCAAGACCCCACC
CTCACAGTTTAGTTGGGAGAGACTGTAACAACGGGGTTTGTCAGATTAACGTGGATCCTG
GCAACCAAATGCTAGGGGTTTTCCCGAACCTTGGAATTCAGTGCGTGCGACGCAGAGAAG
TCAGTCAAGCGATACAAGATCGTTTAAACCACGGAGTGAATCCCTTCGGTACGATGTTGG
ACGGAGACGAGAGATCCGCAGTTGATGTCGACCTTAATATTGTTCGTCTTTGTTTTGAAG
CTTTTATCCCGGACGCAAGGGGAAAATACACACAAAAACTGGAACCCGTTGTGTCAGATC
CAATATATGATAAAAAAGCCACTTGTTCGTCTGTGTTGAAAATATGTCGTGTCGATAAAA
CCCACGGAAGCTGTATGGGTAACGAAGAAGTGTTTCTCTTGTGCGACAAAGTACAGAAAG
AGGACATCCAAGTTGTTTTCTATCGCGATAACTGGGAAGCTTTGGGTGACTTTTCATCCG
TGGATGTTCATAGACAGGTTGCTATTGTGTTCCGAACACCACCTTTTTGCAACGAAAATA
TCCAAGAGAAAGTAGATGTACAATTTAAACTAAGAAGGCCATCAGACATGGAGACAAGCA
AGCCCCTAGTATTCACCTATCTCCCTGTATATCATGCCATGTTACTGGATAGGTAGCATA
CTAACAGCCACTGATATAATGAAGAGAAAAGATCAGACCATTCTGAGAGGAGGTTGAAAA
GCACTGAGGCCGGAAGTTTCGTTTCAAAATGGATTTCTTCACCAAATTTTTCGAACCCTG
ATTTTGAACGAGTAGAACTGGTCATTGATGTTTTATTGCAAAACTTTATCTGTGTTTTGA
GGCCTACTTCATTTATACCATGTTCCATGATATAATCATAGAGTATCTATGAACTTTGCA
AGAAAATCAAAGCATATCTTTAATTGTAATTCTAATTGCCTGCTTGAAAATCTACTGTAT
TTTTTAATTTATTTTTACAAATCCAATTGTCTTGCCCTATATTAGGGTTATGATTTAAAA
CTGCTGTCTCCAGTTGCAATTATAAGCTCTTGCAACTGCAAAGTGTGAACTTATGTTGTA
GCAACTTGCATTCATACGTTTCAAAATATCTTTTTCACTTTGTAGCACTTTTAGTAGGTC
TATTGTTTTTTTTAAACGACTGTTTTATAAAAAAAATAATTTAAAGAAACCGTGTGTACA
ATTGATTTAATGGTAAAAGCACTTGAGTTTTAAACTATTTTACATTTATGTAGAGCGTAG
ACACAACTGCATTGCATTCGTTTTTATTGCAAGGTCTGGTTAGGTTATATTTAGCTGCTA
TCATCAGCATATTAGGTCGGTCATAAAAGTTAAAACCGCTACTCAAGGGTTTAAAATTGT
CGTTTAATAAACAAATAAAGAGAAAA
| Gene3D |
RHD_DNA_bind_dom_sf (IPR037059) - T[4-185] 6.3E-66 |
| ProSiteProfiles |
RHD_DNA_bind_dom (IPR011539) - T[9-188] 71.361 |
| PANTHER |
NFkB/Dor (IPR000451) - T[12-290] 1.2E-132 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[12-194] 9.94E-71 |
| Pfam |
RHD_DNA_bind_dom (IPR011539) - T[14-184] 7.8E-67 |
| PRINTS |
NFkB/Dor (IPR000451) - T[18-35] 5.0E-41 - T[173-187] 5.0E-41 - T[206-226] 5.0E-41 - T[237-255] 5.0E-41 - T[278-292] 5.0E-41 |
| ProSitePatterns |
RHD_CS (IPR030492) - T[27-33] . |
| Gene3D |
Ig-like_fold (IPR013783) - T[189-295] 2.2E-42 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[190-292] 3.73E-41 |
| SMART |
IPT_dom (IPR002909) - T[191-287] 2.0E-21 |
| CDD |
IPT_NFkappaB (IPR033926) - T[192-288] 3.84277E-49 |
| Pfam |
RHD_dimer (IPR032397) - T[193-288] 5.7E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| REL_HUMAN | 53.43 % | 308 | 5.42E-101 |
| TF65_HUMAN | 53.069 % | 302 | 1.14E-99 |
| RELB_HUMAN | 50.355 % | 280 | 7.23E-91 |