- Transcript 'KH2012:KH.C11.238.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.238.v2.A.SL1-1
Possible name(s)
REL; RELA; RELB
Gene model
Location
KhC11 [3,650,557 / 3,658,587]
Amino acid sequence
Length: 720
>KH.C11.238.v2.A.SL1-1
TRFYTVATWSNHFNMDRIPVLEIVEQPKQRGMRFRYECEGRSAGSIPGKNTNGDRKTWPS
CQVLNYSGVAIMRVSLVSKDDPPRPHPHSLVGRDCNNGVCQINVDPGNQMLGVFPNLGIQ
CVRRREVSQAIQDRLNHGVNPFGTMLDGDERSAVDVDLNIVRLCFEAFIPDARGKYTQKL
EPVVSDPIYDKKATCSSVLKICRVDKTHGSCMGNEEVFLLCDKVQKEDIQVVFYRDNWEA
LGDFSSVDVHRQVAIVFRTPPFCNENIQEKVDVQFKLRRPSDMETSKPLVFTYLPVYHEM
PQKHKFPTQLLSHPIRSNNNKNGEIRKFISDRIRKSKEPAQRQMYSPNPNIAAASLNHHG
MIRNPSNPTICPTAQPSTEQFTSTMNPSYQYVKREDHSSTAIFPGDPQWPDSSHSQPPFP
SASSLFNDSMVQPGFGPIQNTTATPFFDANSGKFISEKSTISEVQKSELAMPTALPPADD
GQTQRSYFWSDLLKQEDSIPRLDAEQTRQLLQDNVSMPDTALENISMDSMLEQWMSKKCS
IEGPMSINLTDILASENLPSTNNGPTQPIENEYQQMSPYPAFSTSNTAPTTSNLLTQSMT
FSQTTMPLDATSTGILSPNHTPQLFNHQQHPVMSPIHPSSHQPQQNAVNMQRMDMNLPGQ
QQRFHPQFSEPTPFGTNSNNNHCIEQTNPGTFALSPTQNDHNVESTIISTFLQNLETVQR
Nucleotide sequence
Length: 2,769
>KH2012:KH.C11.238.v2.A.SL1-1
GTTTTTCCATAGACTTTGCGTTAAACAAAATTCTTCTACCTGTAAACCCGCTTTTACACT
GTAGCTACTTGGTCCAATCATTTCAATATGGATAGAATTCCAGTATTGGAGATTGTGGAG
CAACCTAAGCAGCGTGGAATGAGGTTTCGATACGAATGTGAAGGGAGATCTGCTGGAAGT
ATTCCTGGGAAAAATACAAATGGCGATCGAAAAACATGGCCGTCATGCCAGGTCTTGAAC
TACTCTGGTGTGGCGATCATGCGAGTTTCACTTGTGTCCAAAGACGACCCACCAAGACCC
CACCCTCACAGTTTAGTTGGGAGAGACTGTAACAACGGGGTTTGTCAGATTAACGTGGAT
CCTGGCAACCAAATGCTAGGGGTTTTCCCGAACCTTGGAATTCAGTGCGTGCGACGCAGA
GAAGTCAGTCAAGCGATACAAGATCGTTTAAACCACGGAGTGAATCCCTTCGGTACGATG
TTGGACGGAGACGAGAGATCCGCAGTTGATGTCGACCTTAATATTGTTCGTCTTTGTTTT
GAAGCTTTTATCCCGGACGCAAGGGGAAAATACACACAAAAACTGGAACCCGTTGTGTCA
GATCCAATATATGATAAAAAAGCCACTTGTTCGTCTGTGTTGAAAATATGTCGTGTCGAT
AAAACCCACGGAAGCTGTATGGGTAACGAAGAAGTGTTTCTCTTGTGCGACAAAGTACAG
AAAGAGGACATCCAAGTTGTTTTCTATCGCGATAACTGGGAAGCTTTGGGTGACTTTTCA
TCCGTGGATGTTCATAGACAGGTTGCTATTGTGTTCCGAACACCACCTTTTTGCAACGAA
AATATCCAAGAGAAAGTAGATGTACAATTTAAACTAAGAAGGCCATCAGACATGGAGACA
AGCAAGCCCCTAGTATTCACCTATCTCCCTGTATATCATGAAATGCCCCAGAAACATAAA
TTTCCGACCCAGCTACTCTCCCATCCGATCAGGAGCAACAACAACAAAAACGGAGAAATT
AGGAAATTTATCAGCGACCGAATACGAAAATCAAAAGAACCAGCTCAAAGACAGATGTAT
TCCCCTAATCCGAACATCGCTGCAGCTTCTCTTAACCATCACGGCATGATAAGGAACCCC
AGCAACCCCACAATTTGTCCAACAGCTCAGCCTTCCACCGAGCAATTTACTTCAACGATG
AACCCAAGCTACCAGTATGTGAAACGGGAAGATCACTCCTCCACCGCCATCTTTCCCGGC
GACCCCCAGTGGCCGGACAGTAGTCATTCCCAGCCACCATTTCCAAGTGCTAGCAGTCTT
TTCAACGACAGCATGGTACAACCAGGGTTCGGCCCCATACAGAACACCACAGCCACTCCA
TTCTTCGATGCAAACAGCGGAAAGTTCATCAGCGAAAAATCAACAATCAGCGAAGTGCAA
AAAAGCGAGCTCGCAATGCCGACAGCTTTGCCGCCTGCAGACGATGGGCAAACGCAACGT
AGTTACTTCTGGAGTGATTTGTTAAAACAGGAAGACAGCATCCCACGTCTTGATGCCGAG
CAAACCCGTCAACTTCTTCAGGACAATGTTTCAATGCCAGACACCGCGTTGGAAAATATT
TCCATGGATTCCATGCTGGAACAGTGGATGTCAAAGAAGTGCAGCATTGAAGGCCCAATG
AGCATCAACCTTACTGATATCCTTGCCAGTGAAAACCTACCATCGACCAACAACGGCCCT
ACACAACCCATTGAGAATGAATACCAACAGATGTCTCCTTACCCTGCTTTCTCCACCTCC
AACACCGCTCCTACAACTTCTAACTTGCTAACCCAGTCAATGACATTCTCCCAAACAACT
ATGCCCCTGGACGCTACCAGCACTGGGATATTATCCCCTAACCATACGCCGCAGCTGTTT
AACCATCAACAACACCCAGTTATGTCCCCAATACATCCTTCGTCCCACCAGCCGCAGCAG
AACGCAGTGAACATGCAGCGAATGGACATGAACCTCCCTGGTCAGCAGCAGCGATTCCAC
CCACAGTTTTCCGAACCCACCCCCTTTGGAACCAACAGCAACAATAACCATTGCATCGAG
CAGACGAACCCAGGAACTTTTGCACTATCCCCCACTCAAAACGACCACAACGTAGAAAGC
ACCATCATAAGCACGTTCCTTCAAAATCTTGAAACTGTGCAGAGATAATGGTCATACTTT
CATTGGAAATCATGGACGAATGATATCAGCACCCACGTCGGGCTCTTCAACGTGCGTTTT
CAGTCCAACTTGAGAGCAACTCTTTTCATTGTGTGTTCATTAACGTTTTATTATTGCGCC
GTTCCAGTGGTTTAACACCGTTGATCACATTTCAAAATAGAGCTGCATAACTCTAGTCAA
CTGAAATTCGTTTGTTTTAAGATATCACGTTTTTAGCTTTTTTGAACTTATTTTTATCAT
TTTTAACTACAATAATTCTGGTGAACTGTTTACAGAAATACCATTGCAGCAACTCTGACG
TAACAGCAAAATGTTTTTTTATGCTAAAGTTTTACTCTCTTTACCCAGCAGCATGCAACT
TGAAAATATAAAATGTCGATTTGGCCTCTTTTTGGCCAATCACATATTTCCAATTTAATG
TCATACGTCTATATCAAGTCAGCATTATGGAACCTGCTCTGAAACTTATCTTATGTTGTA
CTAATACTATTCCTATAACCTTCAGTAGTGTGTTTGAACTATTACGTAGCAACCGATGTG
TTTGGAACC
| Gene3D |
RHD_DNA_bind_dom_sf (IPR037059) - T[11-192] 4.5E-65 |
| ProSiteProfiles |
RHD_DNA_bind_dom (IPR011539) - T[16-195] 71.361 |
| PANTHER |
NFkB/Dor (IPR000451) - T[16-399] 4.2E-138 - T[550-658] 4.2E-138 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[19-201] 7.15E-70 |
| Pfam |
RHD_DNA_bind_dom (IPR011539) - T[21-191] 5.4E-66 |
| PRINTS |
NFkB/Dor (IPR000451) - T[25-42] 4.9E-40 - T[180-194] 4.9E-40 - T[213-233] 4.9E-40 - T[244-262] 4.9E-40 - T[285-299] 4.9E-40 |
| ProSitePatterns |
RHD_CS (IPR030492) - T[34-40] . |
| Gene3D |
Ig-like_fold (IPR013783) - T[196-306] 3.6E-42 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[197-304] 3.27E-41 |
| SMART |
IPT_dom (IPR002909) - T[198-294] 2.0E-21 |
| CDD |
IPT_NFkappaB (IPR033926) - T[199-295] 1.09053E-47 |
| Pfam |
RHD_dimer (IPR032397) - T[200-295] 2.6E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| REL_HUMAN | 53.43 % | 315 | 2.74E-98 |
| TF65_HUMAN | 51.724 % | 306 | 1.71E-95 |
| RELB_HUMAN | 50.177 % | 287 | 6.18E-88 |