Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 715

>KH.C1.124.v3.A.SL3-1
RCKSFLSEFCQDDHSGSGKCFKYGQVLTKLAHREQVALTIDLEDLKEYDSDLVENVLENT
LRYQKIFADVVEELLPDYKEREATYKDSLDVYIEHRMHMEQRNHQDPAEHRDWRNKYPSE
LMRRYEICFKNLSDEKALPMRDLKAAHIGKLSTVRGIVIRATDIKPMMCVATYTCDRCGG
ETYQPISSPTFMPLVVCPSEDCQTNRSGGRLCLQNRGSKFTKFQEVKIQEHSDMVPVGNI
PRSLTIYCRGETTGCASAGDHISITGVFLPMLKIGFRQMQQGLLTDSYMEAHRVVRMNKI
EENEQDESEMTEEEIEQITQDDFYDKLANSIAPEIYGHEDIKKALLLLLVGGVDRNANGM
KIRGNINICLMGDPGVAKSQLLSYIDRIAPRSQYTTGRGSSGVGLTAAVMKDPVTNEIVV
EGGALVLADQGVCCIDEFDKMMDSDRTAIHEVMEQQTISIAKAGIMASLNARVSILAAAN
PAYGRYNPKKSIEHNIQLPAALLSRFDLLWLIQDKPDRENDLRLAQHITYVHMHSVHPPL
QFQPIDMRLMRKYIALCKSKHPVVPLELRDYITAAYVELRKEARASNDATFTSARTLLSI
LRIATALARLRLADVVEKDDVNEAMRMMEMSKDTLNPGSENIQRKQRPTDAIFQILRDMA
PQDGSNTVSSVRVADARQRCVAKGFTPDQFDEAVEEYEALNVWLLNTAKTRLTFI

Nucleotide sequence

Length: 2,289

>KH2012:KH.C1.124.v3.A.SL3-1
AACGTTGCAAGTCGTTTTTAAGTGAATTCTGTCAAGACGACCATTCGGGTTCGGGAAAAT
GCTTTAAATACGGCCAGGTTTTGACCAAGCTAGCACATCGTGAACAAGTAGCACTTACCA
TTGACCTTGAAGATCTTAAAGAATACGACTCTGATCTTGTTGAGAATGTATTGGAAAACA
CCCTCCGTTATCAGAAGATCTTCGCAGATGTGGTTGAAGAACTATTGCCCGATTACAAGG
AGAGAGAGGCTACCTACAAAGATTCTTTGGATGTGTACATCGAACATAGGATGCATATGG
AGCAGAGGAATCATCAGGATCCTGCAGAACACAGGGACTGGAGGAATAAATATCCATCAG
AACTTATGAGGAGATATGAGATTTGCTTCAAGAACCTGTCGGATGAAAAGGCTCTTCCAA
TGCGAGATCTAAAAGCTGCTCACATCGGGAAGTTATCAACTGTACGTGGCATCGTTATAA
GAGCCACCGACATCAAACCCATGATGTGTGTAGCTACATATACATGTGATAGATGTGGCG
GGGAGACGTATCAACCGATTTCATCCCCCACGTTTATGCCACTCGTCGTATGTCCAAGTG
AGGACTGCCAAACCAACCGCAGTGGTGGTCGGCTATGTCTGCAGAATCGTGGATCTAAGT
TCACCAAGTTCCAGGAGGTTAAAATTCAGGAACATAGTGACATGGTGCCTGTTGGAAACA
TTCCTCGGAGCTTGACTATCTACTGCAGAGGAGAGACAACTGGATGCGCATCCGCTGGCG
ACCACATTAGTATCACAGGTGTCTTTCTTCCAATGTTGAAGATTGGATTCCGACAAATGC
AACAAGGCCTGCTCACTGATTCCTACATGGAGGCTCATAGAGTTGTTCGGATGAACAAGA
TTGAGGAAAACGAGCAAGATGAATCAGAGATGACAGAAGAAGAAATTGAGCAGATAACTC
AGGATGATTTTTACGATAAACTTGCGAACTCAATTGCCCCCGAAATTTACGGACACGAGG
ATATTAAGAAAGCCCTTCTTCTTCTTCTTGTTGGTGGTGTGGATAGGAATGCTAATGGTA
TGAAAATCAGAGGAAATATCAACATCTGTTTGATGGGAGACCCTGGTGTCGCCAAGTCCC
AATTGCTTTCTTACATTGACCGAATTGCCCCAAGAAGTCAATACACTACAGGTCGTGGAT
CATCTGGTGTGGGTCTTACTGCTGCAGTAATGAAGGACCCGGTTACAAACGAGATTGTAG
TTGAGGGGGGTGCGTTGGTTCTTGCTGACCAGGGTGTCTGCTGTATTGACGAGTTTGATA
AAATGATGGACAGTGATCGAACAGCCATACACGAGGTTATGGAACAACAAACTATCTCAA
TCGCAAAGGCTGGTATAATGGCTTCACTGAATGCTCGCGTGTCAATCCTCGCTGCAGCCA
ACCCTGCATACGGTCGCTACAACCCAAAGAAATCAATTGAACACAACATCCAATTACCGG
CTGCTCTTCTTTCAAGATTTGATCTTCTCTGGCTGATTCAGGACAAACCGGATCGCGAAA
ATGATCTCAGATTGGCGCAGCACATCACATATGTGCATATGCATTCGGTCCATCCACCTT
TGCAATTCCAACCTATAGACATGCGGCTTATGAGGAAATACATAGCTCTGTGTAAAAGCA
AGCACCCTGTTGTTCCTCTGGAATTGCGTGATTACATCACAGCAGCTTATGTTGAATTAC
GTAAAGAAGCTCGTGCCAGCAATGACGCTACGTTCACATCCGCTCGTACCCTTCTGTCCA
TTCTACGCATTGCCACCGCACTGGCTCGTTTACGACTCGCTGACGTAGTAGAAAAAGATG
ACGTCAACGAAGCAATGCGAATGATGGAAATGTCGAAAGATACTCTGAATCCCGGATCGG
AAAATATTCAACGAAAACAACGACCTACTGACGCGATCTTCCAAATATTGCGCGACATGG
CGCCACAAGATGGCAGCAACACGGTGTCCAGTGTCAGAGTTGCTGACGCCAGACAACGCT
GTGTTGCTAAAGGTTTCACTCCAGACCAATTTGACGAAGCTGTTGAAGAATATGAAGCTT
TGAATGTGTGGCTGCTAAACACGGCCAAGACACGTCTCACTTTTATATAATGCATATCAT
TCTGCTGCTACAAGTTTTGTATATACAGAAGACATTTTGTCCCCAAACAATTATGTTGTA
CTAGTTGTGTTTTATAGTCTTTGCGAAAAGCTATTAACTGCCAAATAAAAAGTCACCATT
TTTCAATTA

InterProScan

Pfam	MCM_N (IPR027925) - T[2-131] 2.4E-19
SUPERFAMILY	NA-bd_OB-fold (IPR012340) - T[3-81] 3.43E-57 - T[126-291] 3.43E-57
PANTHER	MCM (IPR031327) - T[14-713] 0.0
PANTHER	MCM7 (IPR008050) - T[14-713] 0.0
PRINTS	MCM7 (IPR008050) - T[117-129] 5.5E-24 - T[155-166] 5.5E-24 - T[173-184] 5.5E-24 - T[190-202] 5.5E-24 - T[282-292] 5.5E-24
SMART	MCM (IPR031327) - T[136-633] 5.1E-281
Pfam	MCM_OB (IPR033762) - T[140-269] 3.1E-31
Pfam	MCM_dom (IPR001208) - T[312-631] 8.5E-134
ProSiteProfiles	MCM_dom (IPR001208) - T[323-528] 95.523
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[333-631] 2.85E-39
PRINTS	MCM_dom (IPR001208) - T[363-378] 1.7E-34 - T[423-437] 1.7E-34 - T[451-464] 1.7E-34 - T[475-487] 1.7E-34 - T[502-510] 1.7E-34
ProSitePatterns	MCM_CS (IPR018525) - T[431-439] .