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TRANSCRIPT CARD

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  1. Clone 'man31j06' > 
  2. Transcript 'Cisavi.CG.ENS81.R1.1...' > 
  3. Transcript 'KH2012:KH.C11.268.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.268.v1.A.nonSL13-1

Possible name(s)

RPS13

Gene model

KH2012:KH.C11.268

Location

KhC11 [977,232 / 979,447]

Sequences

Amino acid sequence

Length: 158

>KH.C11.268.v1.A.nonSL13-1
LFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIGVI
LRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKF
RLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA

Nucleotide sequence

Length: 503

>KH2012:KH.C11.268.v1.A.nonSL13-1
TTCTTTTCACGCCAACCAGCAACATGGGTCGTATGCACGCACCTGGAAAGGGTCTTTCTT
CATCAGCACTTCCATACAGAAGAAGTGTTCCAACATGGTTAAAGCTTAGTTCCGAGGATG
TAAAAGAACAAATCTACAAACTCGCAAAGAAGGGACTTCGACCTTCCCAGATCGGAGTTA
TTCTTAGAGATTCTCATGGTGTTGCTCAGGTACGATTTGTCACTGGCAACCAGATCTTGA
GAGTTCTCAAAGCAAAGGGACTTGCCCCAGATCTTCCTGAAGATATTTACCATCTTATTA
AGAAGGCTGTTGCCATGCGCAAACATTTGGAGAGAAACAGAAAAGACACTGACTCCAAAT
TCCGTCTTATTCTCGTCGAAAGTCGTATTCACCGTCTTGGGCGTTACTACAAGACCAAAG
GTGTTCTACCACCTAACTGGAAATACGAGAGTGCCACCGCTTCTGCTCTTGTAGCGTAAA
CTGATATTAAATCTTGACACAAA

InterProScan

Pfam
Ribosomal_S13/S15_N (IPR012606) - T[8-67] 3.4E-32
PANTHER
Ribosomal_S15P (IPR023029) - T[8-158] 8.5E-82
SMART
Ribosomal_S13/S15_N (IPR012606) - T[8-67] 4.0E-38
Hamap
Ribosomal_S15P (IPR023029) - T[10-156] 31.728
SUPERFAMILY
S15_NS1_RNA-bd (IPR009068) - T[73-149] 7.65E-21
CDD
Ribosomal_S15 (IPR000589) - T[77-152] 1.14929E-26
SMART
Ribosomal_S15 (IPR000589) - T[78-156] 2.1E-11
Pfam
Ribosomal_S15 (IPR000589) - T[82-154] 5.1E-16
ProSitePatterns
Ribosomal_S15 (IPR000589) - T[105-135] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS13_HUMAN 90.066 % 283 4.84E-100