- Transcript 'KH2012:KH.C11.268.v1...' >
- Clone 'csma095a02' >
- Transcript 'KH2012:KH.C11.268.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.268.v1.A.nonSL23-1
Possible name(s)
RPS13
Gene model
Location
KhC11 [977,141 / 979,447]
Amino acid sequence
Length: 184
>KH.C11.268.v1.A.nonSL23-1
VTCLKSILLDFYGLRIDDFLNLVPIILFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLK
LSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPED
IYHLIKKAVAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATAS
ALVA
Nucleotide sequence
Length: 594
>KH2012:KH.C11.268.v1.A.nonSL23-1
GTCTTTCTTCTTTAAGTTACCTGTTTAAAATCTATTTTATTAGATTTCTATGGGTTACGG
ATTGATGATTTCCTGAACCTCGTTCCCATAATTCTTTTCACGCCAACCAGCAACATGGGT
CGTATGCACGCACCTGGAAAGGGTCTTTCTTCATCAGCACTTCCATACAGAAGAAGTGTT
CCAACATGGTTAAAGCTTAGTTCCGAGGATGTAAAAGAACAAATCTACAAACTCGCAAAG
AAGGGACTTCGACCTTCCCAGATCGGAGTTATTCTTAGAGATTCTCATGGTGTTGCTCAG
GTACGATTTGTCACTGGCAACCAGATCTTGAGAGTTCTCAAAGCAAAGGGACTTGCCCCA
GATCTTCCTGAAGATATTTACCATCTTATTAAGAAGGCTGTTGCCATGCGCAAACATTTG
GAGAGAAACAGAAAAGACACTGACTCCAAATTCCGTCTTATTCTCGTCGAAAGTCGTATT
CACCGTCTTGGGCGTTACTACAAGACCAAAGGTGTTCTACCACCTAACTGGAAATACGAG
AGTGCCACCGCTTCTGCTCTTGTAGCGTAAACTGATATTAAATCTTGACACAAA
| PANTHER |
Ribosomal_S15P (IPR023029) - T[34-184] 1.5E-81 |
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[34-93] 4.7E-32 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[34-93] 4.0E-38 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[36-182] 31.728 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[99-175] 1.15E-20 |
| CDD |
Ribosomal_S15 (IPR000589) - T[103-178] 9.24056E-27 |
| SMART |
Ribosomal_S15 (IPR000589) - T[104-182] 2.1E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[108-180] 7.6E-16 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[131-161] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.066 % | 283 | 1.45E-99 |