- Transcript 'KH2012:KH.C11.268.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.268.v1.A.nonSL28-1
Possible name(s)
RPS13
Gene model
Location
KhC11 [977,226 / 979,447]
Amino acid sequence
Length: 160
>KH.C11.268.v1.A.nonSL28-1
IILFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIG
VILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDS
KFRLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA
Nucleotide sequence
Length: 509
>KH2012:KH.C11.268.v1.A.nonSL28-1
CCATAATTCTTTTCACGCCAACCAGCAACATGGGTCGTATGCACGCACCTGGAAAGGGTC
TTTCTTCATCAGCACTTCCATACAGAAGAAGTGTTCCAACATGGTTAAAGCTTAGTTCCG
AGGATGTAAAAGAACAAATCTACAAACTCGCAAAGAAGGGACTTCGACCTTCCCAGATCG
GAGTTATTCTTAGAGATTCTCATGGTGTTGCTCAGGTACGATTTGTCACTGGCAACCAGA
TCTTGAGAGTTCTCAAAGCAAAGGGACTTGCCCCAGATCTTCCTGAAGATATTTACCATC
TTATTAAGAAGGCTGTTGCCATGCGCAAACATTTGGAGAGAAACAGAAAAGACACTGACT
CCAAATTCCGTCTTATTCTCGTCGAAAGTCGTATTCACCGTCTTGGGCGTTACTACAAGA
CCAAAGGTGTTCTACCACCTAACTGGAAATACGAGAGTGCCACCGCTTCTGCTCTTGTAG
CGTAAACTGATATTAAATCTTGACACAAA
| PANTHER |
Ribosomal_S15P (IPR023029) - T[10-160] 8.9E-82 |
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[10-69] 3.5E-32 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[10-69] 4.0E-38 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[12-158] 31.728 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[75-151] 7.95E-21 |
| CDD |
Ribosomal_S15 (IPR000589) - T[79-154] 1.33643E-26 |
| SMART |
Ribosomal_S15 (IPR000589) - T[80-158] 2.1E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[84-156] 5.2E-16 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[107-137] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.066 % | 283 | 5.08E-100 |