- Transcript 'Cisavi.CG.ENS81.R1.4...' >
- Molecular Tool 'Moocci.Tbx6-r.b>Moocci.Lhx3/4.b' >
- Transcript 'KH2012:KH.C11.268.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C11.268.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.268.v1.A.nonSL3-1
Possible name(s)
RPS13
Gene model
Location
KhC11 [977,234 / 979,447]
Amino acid sequence
Length: 158
>KH.C11.268.v1.A.nonSL3-1
LFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIGVI
LRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKF
RLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA
Nucleotide sequence
Length: 501
>KH2012:KH.C11.268.v1.A.nonSL3-1
CTTTTCACGCCAACCAGCAACATGGGTCGTATGCACGCACCTGGAAAGGGTCTTTCTTCA
TCAGCACTTCCATACAGAAGAAGTGTTCCAACATGGTTAAAGCTTAGTTCCGAGGATGTA
AAAGAACAAATCTACAAACTCGCAAAGAAGGGACTTCGACCTTCCCAGATCGGAGTTATT
CTTAGAGATTCTCATGGTGTTGCTCAGGTACGATTTGTCACTGGCAACCAGATCTTGAGA
GTTCTCAAAGCAAAGGGACTTGCCCCAGATCTTCCTGAAGATATTTACCATCTTATTAAG
AAGGCTGTTGCCATGCGCAAACATTTGGAGAGAAACAGAAAAGACACTGACTCCAAATTC
CGTCTTATTCTCGTCGAAAGTCGTATTCACCGTCTTGGGCGTTACTACAAGACCAAAGGT
GTTCTACCACCTAACTGGAAATACGAGAGTGCCACCGCTTCTGCTCTTGTAGCGTAAACT
GATATTAAATCTTGACACAAA
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[8-67] 3.4E-32 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[8-158] 8.5E-82 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[8-67] 4.0E-38 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[10-156] 31.728 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[73-149] 7.65E-21 |
| CDD |
Ribosomal_S15 (IPR000589) - T[77-152] 1.14929E-26 |
| SMART |
Ribosomal_S15 (IPR000589) - T[78-156] 2.1E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[82-154] 5.1E-16 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[105-135] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.066 % | 283 | 4.84E-100 |