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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA189YC24' > 
  2. Clone 'CCAO13187' > 
  3. Clone 'ma167i03' > 
  4. Transcript 'Moocul.CG.ELv1_2.S72...' > 
  5. Transcript 'KH2012:KH.C11.268.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.268.v1.A.nonSL34-1

Possible name(s)

RPS13

Gene model

KH2012:KH.C11.268

Location

KhC11 [977,136 / 979,447]

Sequences

Amino acid sequence

Length: 184

>KH.C11.268.v1.A.nonSL34-1
VTCLKSILLDFYGLRIDDFLNLVPIILFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLK
LSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPED
IYHLIKKAVAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATAS
ALVA

Nucleotide sequence

Length: 599

>KH2012:KH.C11.268.v1.A.nonSL34-1
ATTTCGTCTTTCTTCTTTAAGTTACCTGTTTAAAATCTATTTTATTAGATTTCTATGGGT
TACGGATTGATGATTTCCTGAACCTCGTTCCCATAATTCTTTTCACGCCAACCAGCAACA
TGGGTCGTATGCACGCACCTGGAAAGGGTCTTTCTTCATCAGCACTTCCATACAGAAGAA
GTGTTCCAACATGGTTAAAGCTTAGTTCCGAGGATGTAAAAGAACAAATCTACAAACTCG
CAAAGAAGGGACTTCGACCTTCCCAGATCGGAGTTATTCTTAGAGATTCTCATGGTGTTG
CTCAGGTACGATTTGTCACTGGCAACCAGATCTTGAGAGTTCTCAAAGCAAAGGGACTTG
CCCCAGATCTTCCTGAAGATATTTACCATCTTATTAAGAAGGCTGTTGCCATGCGCAAAC
ATTTGGAGAGAAACAGAAAAGACACTGACTCCAAATTCCGTCTTATTCTCGTCGAAAGTC
GTATTCACCGTCTTGGGCGTTACTACAAGACCAAAGGTGTTCTACCACCTAACTGGAAAT
ACGAGAGTGCCACCGCTTCTGCTCTTGTAGCGTAAACTGATATTAAATCTTGACACAAA

InterProScan

PANTHER
Ribosomal_S15P (IPR023029) - T[34-184] 1.5E-81
Pfam
Ribosomal_S13/S15_N (IPR012606) - T[34-93] 4.7E-32
SMART
Ribosomal_S13/S15_N (IPR012606) - T[34-93] 4.0E-38
Hamap
Ribosomal_S15P (IPR023029) - T[36-182] 31.728
SUPERFAMILY
S15_NS1_RNA-bd (IPR009068) - T[99-175] 1.15E-20
CDD
Ribosomal_S15 (IPR000589) - T[103-178] 9.24056E-27
SMART
Ribosomal_S15 (IPR000589) - T[104-182] 2.1E-11
Pfam
Ribosomal_S15 (IPR000589) - T[108-180] 7.6E-16
ProSitePatterns
Ribosomal_S15 (IPR000589) - T[131-161] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS13_HUMAN 90.066 % 283 1.45E-99